Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2297 ATGGGGCAAGAGAACCTCTCAGCTCACAAGAGAAGCAGCGCCGCCAACGCCCTTCCAACCACCAACGGCCGAGCACGCTCCGCCCCCCGTGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACCATCCTCTGCGGTTTCGTCACCATCCTTGTCCTTCGCGGCACCATCGGCGTCAACCTCTCCTCCTCCGACGCTGATGCCGTCAACCAGAGCCTCATCGAGGAGACCAACCGCATTCTCGCTGAGATCCGCTCCGACTCCGACCCCGACGACAACGACACCYCTTTCAGCCMCAACRMCACCGCCGCCTTCTCCCTWGGCCCCAAGATCTCCGATTGGGATCAACAACGCCAMCAATGGCTCCAGCAAAACCCTGAATACCCTARTTTCGTGAGAGGTAAAGCTCGAATCTTGCTCCTCACTGGTTCACCTCCAAAACCCTGTGACAACCCAATTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAAATTGATTACTGTAGATTGCACGGGATTGAGATTGTGTACAATTTGGCGCATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTGCCAATGATTAGAAGGTTGATGTTCTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTCTTCACTGACATGGTTTTTGAGCTTCCTTTGTCTAAGTATGATGATTACAATTTGGTACTTCATGGTTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATTGCTGTGAATACCGGCAGCTTCTTGTTTCGGAATTGCCAGTGGTCTTTAGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGTCYAGTGAGGGAGGAGGCTGGTAAGGTCTTAACTGCRAATTTGAAGGGTCGCCCGGCATTTGAGGCCGATGATCAATCTGCATTGATATACCTTTTGTTGTCCAAAAAGGAGAAGTGGATGGATAAGGTTTTCCTTGAGAATTCTTACTACCTGCACGGTTACTGGGCTGGCTTGGTTGACCGGTATGAAGAGATGGTTGAGAAGTACCATCCCGGATTAGGAGATGAGAGGTGGCCTTTCGTGACACATTTTGTGGGATGTAAACCTTGTGGGAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGTTTCCGTCACCGTGGCTTGTTGAGCCCTAAGATCAAGAGAATAAGAAATGAGACAGTTACTCCTTTGGAGTATGTAGATCAGTTTGATATCAGAAGACATTCTACAGTGAGCAGTGAATCAAAAAGCCAGTGA 1344 0.4859 MGQENLSAHKRSSAANALPTTNGRARSAPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLSSSDADAVNQSLIEETNRILAEIRSDSDPDDNDTXFSXNXTAAFSLGPKISDWDQQRXQWLQQNPEYPXFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDKELAGYWAKLPMIRRLMFSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGXVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMVEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEYVDQFDIRRHSTVSSESKSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2297 447 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 281 IPR029044 -
Amo11g2297 447 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 9 440 IPR008630 GO:0016021|GO:0016757
Amo11g2297 447 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 9 440 - -
Amo11g2297 447 MobiDBLite consensus disorder prediction 1 31 - -
Amo11g2297 447 Pfam galactosyl transferase GMA12/MNN10 family 137 375 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2297 Amo-Chr11 123817839 123819938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2297 1 446 Glycosyltransferase AT5G07720 76.688 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2297 K08238 - gmx:100793238 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2297 11 123817839 123819938 Amo11g2297 11 123817839 123819938 ECH