Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2288 ATGGGTCCGAACGAAGACCGATCCGAAATAGTGTTCTTCGACGTCGAAACAACCGTTCCAACCCGACCCGGTCAGGGTTTTGCGATTCTTGAGTTCGGAGCCATTCTTGTGTGCCCGAGAACGTTGACGGAGCTCCGAAACTACTCCACACTGGTTCGACCCGCCGACCTCTCACTCATTTCGCCCTTGTCGGAGCGCTGCAACGGTATCACCGCTGACGCCGTCGCCGCCGCACCTACCTTCGCTGACATCGCCGACGCGGTTTACGACCTCCTCCATGGCCGGATTTGGGCGGGTCACAATATCTTAAGATTCGACTGTGCTCGGATCAGAGAGGCATTTGCTGCTATCAATCAGCAAGCACCAGAGCCAAAGGGTGCTATTGACTCTCTGGTTGTGTTAACACAAAAATTTGGAAGAAGAGCTGGTAATATGAAGATGGCTTCTCTTGCTACATATTTCGGGCTTGGACAGCAAACACATAGGAGCTTAGATGATGTTCGAATGAATCTTGAAGTACTTAAATACTGCTCAACAGTTCTATTCTTGGAGTCTAGTCTCCCAGATATATTGACTGCAAACAGTTGGATTTCACCCAATGCTATTACCAGAAGTCGTAGTAACGGGAAATCTCCCATAGATGGAGGCTCATCAAATATGAACAAGGATTTTGTAATGTCATCATCTGCCACTGCAACCAAGGAAGAAAATCATCCAATACTTTCTCTTACAAGGGGCAATGCAAATGGAGCTGTCGTAGATACTGCACAGTCCAATATAGATAAACAAGACTCTTTCGATCTACGTACTCTTGGTGATGAAATACAAAAGTCCATTCAGTCTGATGTTGCCATGGATGAAAAACCCACACAAGAGTCAACTGAGATGTCTTCCTCATCTTTTGTGTCTCCAGCATGCAGCAGCTACGTTGTTCTAGAACCGGATGAAATATGTATTCCTTCTATTGATGCATCTCTTGTTCCATCTCTCTTTGGCAGTCGGAATATAGAATTACAGCACAGTGGTTTCCCCTTTCAGCTTCATTGCACTAGTCTGAAAGTTCGGTTTGGAATAAGCACAAAGTTTTACGATAATGCTGGTCGGCCGCGGTTAAATTTTGTAGTTGACGCATCACCGAGTTTATGTAAGGTTCTTGATGCATGTGACAGTGTTGTACAAAAGTTATCCGTGGATTCTGGAAGCAGCTCTGATTGGAGGCCAGTTGTTATTAGAAAAGAAGGCTTCTTCAACTATCCGACTGCCAGATTGCATATACCTACAGCAGTATGTGGAGACGTTGCCTTCTATGCCACTGAGATATATCAGAGAGAATCATCTGGCACTGTGCAAAGACTCCTCTTCAGCAAGTTTGATGCCGAAGAACTGGGTTCGTTGTTCACGCCTGGGACATTTGTGGACGCATTCTTCTCCCTAGATCCATATGACTATCAGCAGAATGCAGGGATCAAACTAGTTGCCAAAAAGTTGATTATCGATTGCAAGTAA 1506 0.4542 MGPNEDRSEIVFFDVETTVPTRPGQGFAILEFGAILVCPRTLTELRNYSTLVRPADLSLISPLSERCNGITADAVAAAPTFADIADAVYDLLHGRIWAGHNILRFDCARIREAFAAINQQAPEPKGAIDSLVVLTQKFGRRAGNMKMASLATYFGLGQQTHRSLDDVRMNLEVLKYCSTVLFLESSLPDILTANSWISPNAITRSRSNGKSPIDGGSSNMNKDFVMSSSATATKEENHPILSLTRGNANGAVVDTAQSNIDKQDSFDLRTLGDEIQKSIQSDVAMDEKPTQESTEMSSSSFVSPACSSYVVLEPDEICIPSIDASLVPSLFGSRNIELQHSGFPFQLHCTSLKVRFGISTKFYDNAGRPRLNFVVDASPSLCKVLDACDSVVQKLSVDSGSSSDWRPVVIRKEGFFNYPTARLHIPTAVCGDVAFYATEIYQRESSGTVQRLLFSKFDAEELGSLFTPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIDCK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2288 501 MobiDBLite consensus disorder prediction 201 222 - -
Amo11g2288 501 CDD DEDDh 11 175 - -
Amo11g2288 501 MobiDBLite consensus disorder prediction 283 298 - -
Amo11g2288 501 MobiDBLite consensus disorder prediction 279 298 - -
Amo11g2288 501 Gene3D - 4 180 IPR036397 GO:0003676
Amo11g2288 501 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 499 - -
Amo11g2288 501 SUPERFAMILY Ribonuclease H-like 8 178 IPR012337 -
Amo11g2288 501 SMART exoiiiendus 9 183 IPR013520 -
Amo11g2288 501 Pfam Exonuclease 11 174 IPR013520 -
Amo11g2288 501 PANTHER PROTEIN NEN3 5 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2288 Amo-Chr11 123458975 123462559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2288 - - ccaj:109808157 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2288 11 123458975 123462559 Amo11g2288 11 123458975 123462559 ECH