Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2284 ATGGCTGCTACCTCCTTGTGTTCATCAACCCTCCAATCCCAAATCAATGGAATCAATCTTTCTAAKACCTCTCTTTCCCAACCACCTTCCCTCACTTTCTCTAGGAGGAGATTTTCAACCATAGTGAAGGCTTCYTCTCGTGTGGACAAGTTTTCAAAGAGTGACATCATTGTTTCTCCGTCAATTCTTTCTGCCAACTTTTCGAAATTGGGAGAGCAGGTGAAAGCAGTGGAGTTAGCTGGTTGTGATTGGATTCATGTTGATGTAATGGATGGTCGTTTTGTTCCAAACATTACAATTGGACCTCTTGTGGTTGATGCATTACGCCCAGTGACTGATCTTCCTCTGGATGTGCACCTGATGATTGTAGAACCTGAACAGCGGGTGCCAGATTTTATCAAGGCAGGAGCTGACATAGTCAGTATCCACTGTGAGCAATCTTCCACCATTCATTTGCATCGGACAGTTAATCAAGTGAAAAGCCTGGGAGCTAAAGCTGGAGTTGTCCTAAACCCTGCTACCCCACTAAGTGCAATAGAATATGTTCTCGATGTGGTTGATTTGGTCCTAATTATGTCCGTGAACCCTGGCTTTGGTGGCCAGAGTTTTATCGAGAGCCAAGTAAAGAAAATTGCTGATTTGAGAAGATTGTGTGTGGAGAAGGGTGTAAATCCYTGGATTGAAGTGGATGGTGGTGTTGGTCCTGCAAATGCTTACAAGGTGATTGAAGCTGGAGCTAATGCTCTCGTTGCTGGTTCTGCTGTGTTTGGAGCTAAAGATTATGCTGAAGCTATAAGAGGTATCAAAYCCAGCAAAAGACCTGAACCAGTTGCTGTGTGA 840 0.4405 MAATSLCSSTLQSQINGINLSXTSLSQPPSLTFSRRRFSTIVKASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPATPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIADLRRLCVEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEAIRGIKXSKRPEPVAV* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2284 279 TIGRFAM rpe: ribulose-phosphate 3-epimerase 58 269 IPR026019 GO:0004750|GO:0006098
Amo11g2284 279 Pfam Ribulose-phosphate 3 epimerase family 58 256 IPR000056 GO:0005975|GO:0016857
Amo11g2284 279 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 189 211 IPR000056 GO:0005975|GO:0016857
Amo11g2284 279 CDD RPE 57 269 IPR000056 GO:0005975|GO:0016857
Amo11g2284 279 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 85 99 IPR000056 GO:0005975|GO:0016857
Amo11g2284 279 PANTHER - 21 266 - -
Amo11g2284 279 Hamap Ribulose-phosphate 3-epimerase [rpe]. 55 271 IPR026019 GO:0004750|GO:0006098
Amo11g2284 279 SUPERFAMILY Ribulose-phoshate binding barrel 50 271 IPR011060 -
Amo11g2284 279 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 21 266 IPR000056 GO:0005975|GO:0016857
Amo11g2284 279 Gene3D Aldolase class I 46 275 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2284 Amo-Chr11 123297877 123301344 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2284 K01783 - gmx:100817791 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2284 11 123297877 123301344 Amo11g2284 11 123297877 123301344 ECH