Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2256 ATGAAGTTGAATAATCTGGCACTAGTTGTTGTTCTAGCAGGGACCATTTTGGGAAATGGGATAATTAGAGGGTGTGATTGCAAGATTGTGCAGTTCATATTTGGTGACTCCCTCTCTGATGTTGGAAACAACAAACGCCTCAATAGAAGCCTTGCTCAGGCCAGCCTCCCTTGGTATGGTATTGATTTTGGTAACGGATTACCCAACGGAAGGTTTACTAACGGCCGCACCGTTGCAGATATTATAGGCGACAATACTGGCCTCCCTAGGCCTCCAGCATTCCTAGACCCATCTTTAACCCCAGAAATTATTCTAGAAAATGGAGCGAACTATGCTTCTGGTGGTGGTGGCATTTTGAATGAAACTGGGCAGTATTTTATCCAGAGGTTTTCTCTGTACAAGCAAATTGAGCTATTTCAGGGGACACAAGAACTAATTGAGGCCAAAATTGGAAACAGTGCGGCACAAAAGTTTTTTCAGGAAGCTAGATATGTTGTTGCGTTAGGGAGCAACGATTTTATCAACAATTACTTAATGCCTGTTTACAGTGATTCATGGACTTACAATGATGACACTTTCATGGACTACTTGATAGGAACACTCAGAGACCAACTCAAGTTGCTTCATGGGTTAGGAGCAAGGGAACTAATGGTATTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTAACAACAAGTGGAAACTGTAGAGAGAAGGCAAACAAATTGGCTCTTTCTTTTAATAAAGCAACAAGCAAGGTGGTAGATGAGTTGGGGCAGCAGCTTCCTGGTGCAAAATATGTATTTGGAGATGCATATGATGTTGTTTATGATGTCATCAGCAATCCAATGAAGTATGGATTCCAAAATGCAGATTCACCGTGTTGTTCGTTTTGGAACATACGACCTGCACTTACATGTGTGCCTGCATCGAAATTGTGCAAAGATAGAAGCAAGTATGTGTTTTGGGATGAATACCACCCCACTGACAGTGCCAATGAGCTAATTGCCAATGAGCTCATCAAGAAATTCGGATTCACACGTGTTGATCAAACCATTCATAATAATAATGCTCCCTCACCAGCACCTGCTTCTGTCTCTGATCTTGCTCCAGTTCCATCTCCACAATAA 1140 0.4281 MKLNNLALVVVLAGTILGNGIIRGCDCKIVQFIFGDSLSDVGNNKRLNRSLAQASLPWYGIDFGNGLPNGRFTNGRTVADIIGDNTGLPRPPAFLDPSLTPEIILENGANYASGGGGILNETGQYFIQRFSLYKQIELFQGTQELIEAKIGNSAAQKFFQEARYVVALGSNDFINNYLMPVYSDSWTYNDDTFMDYLIGTLRDQLKLLHGLGARELMVFGLGPMGCIPLQRVLTTSGNCREKANKLALSFNKATSKVVDELGQQLPGAKYVFGDAYDVVYDVISNPMKYGFQNADSPCCSFWNIRPALTCVPASKLCKDRSKYVFWDEYHPTDSANELIANELIKKFGFTRVDQTIHNNNAPSPAPASVSDLAPVPSPQ* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2256 379 Gene3D SGNH hydrolase 31 348 IPR036514 -
Amo11g2256 379 SUPERFAMILY SGNH hydrolase 162 346 - -
Amo11g2256 379 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 361 - -
Amo11g2256 379 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 5 361 - -
Amo11g2256 379 MobiDBLite consensus disorder prediction 359 379 - -
Amo11g2256 379 Pfam GDSL-like Lipase/Acylhydrolase 32 342 IPR001087 GO:0016788
Amo11g2256 379 CDD SGNH_plant_lipase_like 32 346 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2256 Amo-Chr11 122754581 122756564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2256 32 343 Acyl Lipid Metabolism Gene Families AT4G10950 33.121 3.66e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2256 - - gmx:100815129 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2256 11 122754581 122756564 Amo11g2256 11 122754581 122756564 ECH