Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo11g2249 | ATGGCGGAAACCACCGCACCGGAAGAACAGCTCCCGGAGAAAAACACATCCTCCTCCTCCTCCTCCTCCTCCGCTGAAGAAATGGACGTGGACAGCCCCAAACCAGAGGACAAAGCGGACGACAAGTCTAAACAGAGTCGTGGTCTCGAGGAAGATGATAAGGTCCAGTCAGGTGACGACAAACCTACTGATTCCAAGAAGCAGAAGGTAGATGACAGAAAGGGGAAAGCCAAAGTTGATGAACAAAGTGAAGACAAGAAGGAGAAGAAAAAGAAGAAGGAGGAGGCGAACAAGGATATACCAACCGGTCCAGTGAAACTGAGTTACAGGACCTTCGATTCTTCGGTGGACATGTACGATTACTTCTACAACTTTCTTCATACCTGGCCCCTTAATCTCAACGTCAACAAGTATGAACATGAAATGTTGCTGGAATTGGTGAAGAAGGGAGACAAGCATGCTGTTCGGAAGATAGGCGGGGGAGTCCGCTCCTTCCAAGTGCGCATGCACCCCACGTGGATGGGCAGGTGCTTCTTCCTCATCAGGGAGGATGAATCTGTGGAAGATTTTTGCTTCCGCAAATGTGTGGATACTATTCTTCCATTGCCGGATGAGATGCTTCCGCAACCTGGAGTGGACACCTATTTACGCAGCAGAAGTAAGTACTCCAAACAGGGAGGGCCTGCCGCTGCCGGATCAGGAAACTGA | 708 | 0.5 | MAETTAPEEQLPEKNTSSSSSSSSAEEMDVDSPKPEDKADDKSKQSRGLEEDDKVQSGDDKPTDSKKQKVDDRKGKAKVDEQSEDKKEKKKKKEEANKDIPTGPVKLSYRTFDSSVDMYDYFYNFLHTWPLNLNVNKYEHEMLLELVKKGDKHAVRKIGGGVRSFQVRMHPTWMGRCFFLIREDESVEDFCFRKCVDTILPLPDEMLPQPGVDTYLRSRSKYSKQGGPAAAGSGN* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo11g2249 | 235 | Coils | Coil | 76 | 99 | - | - | |
| Amo11g2249 | 235 | MobiDBLite | consensus disorder prediction | 29 | 100 | - | - | |
| Amo11g2249 | 235 | PANTHER | - | 18 | 222 | IPR044673 | - | |
| Amo11g2249 | 235 | Gene3D | - | 102 | 198 | - | - | |
| Amo11g2249 | 235 | Pfam | Protein of unknown function (DUF3223) | 125 | 196 | - | - | |
| Amo11g2249 | 235 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Amo11g2249 | 235 | MobiDBLite | consensus disorder prediction | 1 | 103 | - | - | |
| Amo11g2249 | 235 | PANTHER | PROTEIN EMBRYO DEFECTIVE 514 | 18 | 222 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo11g2249 | Amo-Chr11 | 122587573 | 122588416 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo11g2249 | - | - | aip:107618984 | 445.277 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo11g2249 | 11 | 122587573 | 122588416 | Amo11g2249 | 11 | 122587573 | 122588416 | ECH | |
| Amo01g4123 | 01 | 116116772 | 116118131 | Amo11g2249 | 11 | 122587573 | 122588416 | hybridization |