Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2172 ATGACGACGCCATTAAACCTTCAGCAGCAGCAGCATCAGCAGCTACAGCAGGCGGCGAGAACCGTGAGGAGGGTGGTGGTGGAGGTTGTTGACGCTCGCAACCTTCTTCCGAAAGATGGACAAGGTAGTTCGAGCCCTTACGTGGTTGCGGACTTCGACGGCCAGAGGAAAAGAACCACCACCCGGTTCAAGGAGCTGAATCCGGTTTGGAACGAGCCCATGGAGTTCATAGTCTCCGACCCGGAGAACATGGAGTTCGAGGAGCTCGAAGTTGAGGTCTACAACGACAGAAAGTTTGGTAACGCTAGTGGGAAGAAGAACCATTTCCTTGGAAGGGTGAAGCTGTACGGAACACAGTTCGCGAGGAGAGGGGAGGAAGGCCTTGTTTACTTCACTTTGGAGAAGAAGAGTGTGTTCAGTTGGGTAAGAGGTGAAATCGGACTCAAGATTTATTACTATGACGAGTTGTTGCCTGAGGATGATAGGCCGCCGCAGGTTCCGCCACCTGAGGAGGGTGGACCGCCGCCGGAGCAGGAGCAAGAGAGGGGGAGACCGCATGGGGTAACGATTGTGGAGGAAGGGAGGGTTTTTGAAGGTCCAGGAACAATGGAACCGCCGCAGATGCATCCACATTGTATGCCTTTTCCTGAACCACAGCCTCACTCGCCGCGTGTGGTGGTGGTGGAGTCTCCGCCGCCAGTTGTTCACGTTCATCACGATCCGCCACAGGGGACGGAGATTGGCGGTGGAGGTACTGGTTCTGGTGGTCCGCCGGAGATGATGCAGTACCCTCCTCCCGTAGGCCCGGCGGCGGCGGAGGTAAGGAGGATGCAGGCGGTGAAAGGGGAGAGAGTGAGAATTCTAAAGAAACCAAACGGCGCCGGCGATTACTCTCCGAAGGTTATTCCGACGAAGCAACACGGCGGCGTTGAGTCCGAACGTGTTCACCCTTACGATCTGGTGGAACCAATGCAGTACTTGTACGTCAGAATCGTGAAAGCTCGAGGGTTAGCACCAAGCGAGGGTCCGTACGTTAAGGTTCGAACGTCAAGTCACTACGTGAAGTCGAAACCAGCGAGTTACCGTCCCAACGAATCCAACGACTCGCCCGAGTGGAATCAGGTCTTTGCCTTGAGCTGCAACAAAACTGATGCTAACACCGCCACATTGGAGATCTCAGTTTGGGACTCACCGTCGGAGAATTTCCTCGGCGGCGTTTGCTTTGATCTCTCCGATGTGCCAGTTCGTGACCCTCCCGATAGCCCACTTGCTCCGCAGTGGTACCGTCTAGACGGTGTTGCCGCCGATCAGATTCCGGGAAGAGTTTCCGGCGACATTCAGCTTTCTGTTTGGATTGGAACTCAATCCGACGATGCGTTCGCTGAAGCTTGGATCTCAGATGCGCCATACGTGGCTCACACGCGCTCAAAGGTATACCAATCGCCAAAGCTTTGGTACCTGCGCGTGACTGTAATCGAAGCTCAAGACCTAAGCATTGCTCCAAATCTGCCACCATTAACGGCTCCAGAAGTTAGAGTGAAGGTGCAGTTAGGGTTTCAGTCAGGTAGAACAAGGCGAGGGAGCATGAACCACCATAGCCTGTCGTTCCACTGGAACGAAGACCTTCTCTTCGTCGCCGGTGAGCCTCTAGAAGATTCCATGATTCTACTTGTTGAAGACCGGACGAGCAAGGAACCTGCACTCTTAGGCCACGTCGTGATTCCATTGACATCAATCGAGCAGCGAATCGACGAGCGCCACGTGCCTGCGAAATGGTTCCCCTTAGAAGGAGGTGGAGGTGGTGGATCCTACTGCGGGCGAGTTCACCTCCGTCTCTGCCTAGAAGGTGGTTATCACGTGCTCGACGAGGCCGCTCACGTGTGCAGCGATTTCCGCCCCACTGCGAAGCAGCTCTGGAAACCACCGATCGGAATCTTGGAGCTGGGAATCCTCGGCGCCCGCGGCCTCCTTCCGATGAAAACAAAGGGCCCAGGGAAGGGCTCGACCGATGCTTACTGTGTAGCCAAGTATGGCAAGAAGTGGGTCCGAACCCGCACCGTAACGGACTCGTTGGATCCACGTTGGAATGAACAGTACACATGGCAGGTCTATGACCCCTGTACCGTTCTAACCATTGGAGTCTTTGACAACTGGCGCATGTTCGCTGACGTGGCAGAGGACAAGCCAGACTGCCGCATAGGGAAGGTACGCATACGAGTATCTACGCTGGAGAGCAACAGGATCTACACAAACTCATACCCACTATTAGTCCTCACACGAAGCGGGCTCAAGAAAATGGGTGAAATCGAGTTAGCCGTCCGGTTCGCCTGCCCATCATTGTTGCCCGACACGTGTGCCGTCTACGGGCAGCCTCTTCTCCCCAGAATGCACTACCTCCGCCCCCTTGGCGTGGCGCAGCAGGAGGCCCTCCGAGGTGCGGCAACGAAGATGGTAGCGCAGTGGCTGGCGCGGTCGGAGCCGCCGCTGGGGCACGAGGTAGTACGTTACATGCTTGACGCAGACTCGCACGCATGGAGCATGAGGAAGAGTAAGGCCAATTGGTTCAGAATCGTTGCGGTTTTGGCTTGGGCCGTTGGGCTTGCAAAATGGTTAGATGACATAAGAAGGTGGAGGAACCCAATAACAACGGTTCTGCTTCACGTTTTGTATTTGGTTCTTGTTTGGTACCCTGATTTGGTTGTCCCAACCGGGTTCTTATACGTGGTTCTTATTGGAATTTGGTATTACCGCTTCAGACCAAAGATACCAGCCGGGATGGATACCCGGTTGAGCCAGTCGGAAGCGGTTGACCCTGATGAGCTTGACGAGGAATTTGATACTATGCCGAGTTCGAAGCCCGCAGAGGTGATTCGGGTTCGCTATGATCGGTTGAGGATGCTTGCGGCCCGGGTCCAAACGGTTTTGGGCGATTTTGCTACCCAAGGGGAGAGGGTTCAGGCCCTTGTGAGTTGGAGGGACCCACGGGCTACAAAGCTGTTCATTGGGGTGTGCCTTGTTATTACTATAATACTGTATACGGTGCCGCCCAAGATGGTTGCGGTGGCGTTGGGTTTTTACTTTTTGAGACACCCAATGTTCAGGGATCCCATGCCGCCGGCGAGTTTGAACTTTTTCCGGCGACTTCCCAGCTTGTCTGATCGCTTGATGTAG 3171 0.5481 MTTPLNLQQQQHQQLQQAARTVRRVVVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPMEFIVSDPENMEFEELEVEVYNDRKFGNASGKKNHFLGRVKLYGTQFARRGEEGLVYFTLEKKSVFSWVRGEIGLKIYYYDELLPEDDRPPQVPPPEEGGPPPEQEQERGRPHGVTIVEEGRVFEGPGTMEPPQMHPHCMPFPEPQPHSPRVVVVESPPPVVHVHHDPPQGTEIGGGGTGSGGPPEMMQYPPPVGPAAAEVRRMQAVKGERVRILKKPNGAGDYSPKVIPTKQHGGVESERVHPYDLVEPMQYLYVRIVKARGLAPSEGPYVKVRTSSHYVKSKPASYRPNESNDSPEWNQVFALSCNKTDANTATLEISVWDSPSENFLGGVCFDLSDVPVRDPPDSPLAPQWYRLDGVAADQIPGRVSGDIQLSVWIGTQSDDAFAEAWISDAPYVAHTRSKVYQSPKLWYLRVTVIEAQDLSIAPNLPPLTAPEVRVKVQLGFQSGRTRRGSMNHHSLSFHWNEDLLFVAGEPLEDSMILLVEDRTSKEPALLGHVVIPLTSIEQRIDERHVPAKWFPLEGGGGGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPIGILELGILGARGLLPMKTKGPGKGSTDAYCVAKYGKKWVRTRTVTDSLDPRWNEQYTWQVYDPCTVLTIGVFDNWRMFADVAEDKPDCRIGKVRIRVSTLESNRIYTNSYPLLVLTRSGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWRNPITTVLLHVLYLVLVWYPDLVVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQSEAVDPDELDEEFDTMPSSKPAEVIRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVITIILYTVPPKMVAVALGFYFLRHPMFRDPMPPASLNFFRRLPSLSDRLM* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2172 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 326 470 IPR035892 -
Amo11g2172 1056 CDD C2C_MCTP_PRT_plant 486 633 - -
Amo11g2172 1056 CDD C2D_MCTP_PRT_plant 645 772 - -
Amo11g2172 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 166 IPR035892 -
Amo11g2172 1056 ProSiteProfiles C2 domain profile. 4 130 IPR000008 -
Amo11g2172 1056 PANTHER BNAA10G16860D PROTEIN 21 1056 - -
Amo11g2172 1056 ProSiteProfiles C2 domain profile. 465 593 IPR000008 -
Amo11g2172 1056 CDD C2B_MCTP_PRT_plant 326 454 - -
Amo11g2172 1056 SMART C2_3c 645 752 IPR000008 -
Amo11g2172 1056 SMART C2_3c 326 422 IPR000008 -
Amo11g2172 1056 SMART C2_3c 24 129 IPR000008 -
Amo11g2172 1056 SMART C2_3c 486 588 IPR000008 -
Amo11g2172 1056 MobiDBLite consensus disorder prediction 159 185 - -
Amo11g2172 1056 Gene3D C2 domain 322 465 IPR035892 -
Amo11g2172 1056 Gene3D C2 domain 19 173 IPR035892 -
Amo11g2172 1056 ProSiteProfiles C2 domain profile. 627 753 IPR000008 -
Amo11g2172 1056 MobiDBLite consensus disorder prediction 290 310 - -
Amo11g2172 1056 Pfam Plant phosphoribosyltransferase C-terminal 901 1056 IPR013583 -
Amo11g2172 1056 ProSiteProfiles C2 domain profile. 308 428 IPR000008 -
Amo11g2172 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 644 796 IPR035892 -
Amo11g2172 1056 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 485 635 IPR035892 -
Amo11g2172 1056 CDD C2A_MCTP_PRT_plant 34 154 - -
Amo11g2172 1056 Gene3D C2 domain 627 776 IPR035892 -
Amo11g2172 1056 Gene3D C2 domain 471 614 IPR035892 -
Amo11g2172 1056 Pfam C2 domain 485 595 IPR000008 -
Amo11g2172 1056 Pfam C2 domain 644 755 IPR000008 -
Amo11g2172 1056 Pfam C2 domain 326 428 IPR000008 -
Amo11g2172 1056 Pfam C2 domain 25 116 IPR000008 -
Amo11g2172 1056 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 21 1056 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2172 Amo-Chr11 119529578 119532748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2172 19 1056 Lipid Metabolism Gene Families AT1G74720 70.917 0.0 1541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2172 - - adu:107467713 2008.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2172 11 119529578 119532748 Amo11g2172 11 119529578 119532748 ECH