Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2008 ATGAAAAAGTCGGTGTTGAAAGAACCCGAGTCGACGACTCATTTCGACTCGCCTCACTCACCATTCCGAATACGATCCTCTCCTCTCTCCGATGGCGGCGATCCTAACGAGTCCGAATCTCCGCCACAGCGGTTTCACTCGCCAGAAAACTCACCGGAAAGTCAACACCGTGACAACTCCAGGGCAATCGTGGTCGTCGGAAGTCCGGCGCACCAATCTCCCTTGCACGATTCCGATCGCCAGAGCCCGACTCCGGAGAATGCACCGCCGGTGGTGGTAATCAACCGCGCTGTGAGGCAGGAGCCTCAGCCTGCGCCGACGAATCTGAGCGCCGGTCATGGAGGACGAGGCAGAGAAGGCGGAGGGAGGGGGAGAAGCAGGACGGCGCCGGCGATGAATAGGGAGAAGATAATGAGGACGGCGGCACTAGGGTTCCGGGTGAGCGAGGTGGTTCTGTGTTTGATTTCGTTTTCGGTTATGGCGGCCGATAAGACTCAAGGTTGGAGTGGTGACTCCTTTTATCGCTACAAGGAATACAGGTATTGTTTATCAATGAACGTTATAGCATTTGTTTATGCTGCATTTCAAGCATGTGATCTTGCCACCCAGTTCTCTGGCAAACAATTACTCGTTCACCATTTCCGCCCTCACTTTGATTTCTTCATGGATCAGGTTCTGGCATATCTCTTGATGTCTGCATCATCATCGGCAGCTACCCGGGTAGATGACTGGCAATCGAACTGGGGAAGAGATGAGTTCACGGAGATGGCGAGTGCCTCAGTTGCTTTCTCCTTCCTAGCATTCATTGCATTTTCCATTAGTTCACTCATCTCTGGTTACAACCTCTTCACTCTCTATCCTGTTCCTTAG 870 0.5253 MKKSVLKEPESTTHFDSPHSPFRIRSSPLSDGGDPNESESPPQRFHSPENSPESQHRDNSRAIVVVGSPAHQSPLHDSDRQSPTPENAPPVVVINRAVRQEPQPAPTNLSAGHGGRGREGGGRGRSRTAPAMNREKIMRTAALGFRVSEVVLCLISFSVMAADKTQGWSGDSFYRYKEYRYCLSMNVIAFVYAAFQACDLATQFSGKQLLVHHFRPHFDFFMDQVLAYLLMSASSSAATRVDDWQSNWGRDEFTEMASASVAFSFLAFIAFSISSLISGYNLFTLYPVP* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2008 289 MobiDBLite consensus disorder prediction 31 49 - -
Amo11g2008 289 PANTHER CASP-LIKE PROTEIN 4A3 72 284 - -
Amo11g2008 289 Pfam Casparian strip membrane protein domain 138 270 IPR006702 -
Amo11g2008 289 MobiDBLite consensus disorder prediction 1 129 - -
Amo11g2008 289 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 72 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2008 Amo-Chr11 108735684 108738527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2008 - - lang:109357411 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2008 11 108735684 108738527 Amo11g2008 11 108735684 108738527 ECH
Amo01g2523 01 88794868 88797569 Amo11g2008 11 108735684 108738527 hybridization