Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1961 ATGTCCAAATTGTTCCATACCGTCTATCTACTTATTATCTTCTCAGCGTGTTTGACCCCTCTGAATAACGCAAACTCGTGCCGTTCATACTGCGGAAACATAAGCATAGACTACCCGTTCGCTCTCCAACACGGTTGCGGCCACCCGGGTTTCCGGGACCTTCTCTTCTGCATCAACGACGTTCTCATGCTCCATATATCATCCGGCTCCTACAAGGTCCTCAACATCGACTACGCTTACCAGGCTCTCACTCTTCACGAGCCACACATCTCAACCTGTGACACCATTGTCCTTGGCAACAAGGGAAATGGCTTCGCCCTCGAACCATGGCGCGCACCTTACATGAACCCTGCACCAGACAACGTCTTCATGCTCATTGGTTGTTCTCCCCGATCACCATTGTTCCAAGGTTTCCCGGGAAAGCACTTGCCATGCCGAAACGTTTCAGGGATGAGCTGCGAAGAGTATTACGGGTGCCCGGCGTGGGATGGTTTGGGCCACAATAAGTGGGCCCGAGAGGAGTTCTTTGGGTCAGGTCCACCGGAGTGCTGTGCGGTGCCGTACGAGACAATCAAGGGGATCAATTTGACAAAGCTGGAGTGTGAAGGGTACAGCAGTGCTTATAGTGTGGCACCATTGAGGGTTGATGGGCCTAGCGAGTGGTCCTATGGGATCAGAGTGAGGTATTCGCTGCAAGGGAATGATGAGTTCTGTGGGGCCTGTGAGGCTACGGGTGGGACCTGTGGCTACGGTGAGGATGCGATTAGGCAGGTTTGTATGTGTGGGAAAGTTAATTCATCCTCCAATTGCGATTCAGTTGGCTTGTCATCGGGAACAAGGCCTATGGCGATGAAAGTGTCAGCAGGATTGTTGACGTACATGCTACTATGGATAACAATAAACCAGATTTAA 912 0.5143 MSKLFHTVYLLIIFSACLTPLNNANSCRSYCGNISIDYPFALQHGCGHPGFRDLLFCINDVLMLHISSGSYKVLNIDYAYQALTLHEPHISTCDTIVLGNKGNGFALEPWRAPYMNPAPDNVFMLIGCSPRSPLFQGFPGKHLPCRNVSGMSCEEYYGCPAWDGLGHNKWAREEFFGSGPPECCAVPYETIKGINLTKLECEGYSSAYSVAPLRVDGPSEWSYGIRVRYSLQGNDEFCGACEATGGTCGYGEDAIRQVCMCGKVNSSSNCDSVGLSSGTRPMAMKVSAGLLTYMLLWITINQI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1961 303 Pfam Wall-associated receptor kinase galacturonan-binding 27 85 IPR025287 GO:0030247
Amo11g1961 303 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Amo11g1961 303 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 9 287 - -
Amo11g1961 303 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 9 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1961 Amo-Chr11 103430995 103434129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1961 3 134 Receptor kinase-like Gene Family AT1G21240 30.435 7.22e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1961 - - gmx:100818252 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1961 11 103430995 103434129 Amo11g1961 11 103430995 103434129 ECH