Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1942 ATGGACTATGGCAATATTTTTGTGGTGATTCTGCTATTCTCTTCTCTATTTATATTTCAATTTGGCCATACAGATGGAAATGGCTTCAAGACTGGTACCATGAGACTGGGTGCAGATGTCATTGTCTTCAGCCGCCATCTGAATAACGGGATACTGACTCAAAGCATTGGGCTTCTGTCTTATACATACATGATGCAAACACAGCTTGACAGAATTGTAGTACCCATGATCAATACATCAAGCGGATCCTTCGGAATATTAAATGACCAAGAGCATTTTATTTCCAATTTGTCCATAATGTTGCGCTGGTCTCCATTCACATCAGAAATAGAACTTTTGAAACAACTTGATGAAATTGGATGTCATGGTACTAAAATTATTATCTACAACTTGTGGTTCAACGATGATAGCAATTTGGAATTAGATTTTGATTTTGATACCGAGGATATTTGTATTGCTGGGGATATCAAGAAGGAGGTTGATGCACTTTCTTCCTGGGAGACATTGAATGAGCAACACACTGCTAACCGGCTTCGATATTCTCTACGTGTTTACTTGTCCATATTGTACTTGAGGTTACCAGAAAGCTTTACAATTATATTGCGAGGGCAAGTTGTGGATCTACATAACATTGCAGACGATCTTCAGTATCCTGAATTTATCTTGTATAAACCACATAGTTCAGATGAGTCTGCAGTTGTGACAACAATTGGATTCGTTAAGGAAGCTCCTGAAGTCAATGTCCATGGCTTCAATATATATCACAAAAATCGGCTGATCCTGCCTTATTGGCAGGTTGTGAGCTATCTGAGAAGTAGAGGCAGAGGAGTTGTCGGTGTCCTGAAAGCAGATTTTATTCAGCCTACTCATAATAAGCAAGATTTTGAGAGGACTTCCTTGTTTGCAAAGCTTGAACATCGCTTGAAGGAAATGACGTGGGAATACTGGGATTGTCATTGTCAACTACTTGGGTATCAGAAAAAGAGGCCTAAGTCTCAGGTCCCCATTGATACTTTGCCGCCAAAACCACCTGGCTTTGAAATACCGGTGGCATTGAACAAAAGTACCTATCCACATAGCACGTTTGAGCAAGTATCTCCTACTAAGAGGAAAGAGAGACATGGATCTATGGACCTTCATAAGATGAAAAAGCAAACAAGGGAACAGGATTTCTCAACAAGTGTTGGTTGCAATGATGAGAATATACAGACTACTGCATGTTCTGAAGACCAGGAGGAAGACCAAGGCACTATACACTTGATACAAGTGAACACAGAACTCCATGCAAGGTGTTTGGAATTTGAAAAGACAAATGAAGAACTTTGCCACAAGGTGACAGAGCTTAGAAGCAAAATTCAAGACGCTAAGATTGAGTATAATAGCCTTTTGTCTCAAGTGCACTACCAGGACCTGATGCTAACATGTATTGTAGATGGTACACCTCTTGCAGGCTAG 1455 0.4014 MDYGNIFVVILLFSSLFIFQFGHTDGNGFKTGTMRLGADVIVFSRHLNNGILTQSIGLLSYTYMMQTQLDRIVVPMINTSSGSFGILNDQEHFISNLSIMLRWSPFTSEIELLKQLDEIGCHGTKIIIYNLWFNDDSNLELDFDFDTEDICIAGDIKKEVDALSSWETLNEQHTANRLRYSLRVYLSILYLRLPESFTIILRGQVVDLHNIADDLQYPEFILYKPHSSDESAVVTTIGFVKEAPEVNVHGFNIYHKNRLILPYWQVVSYLRSRGRGVVGVLKADFIQPTHNKQDFERTSLFAKLEHRLKEMTWEYWDCHCQLLGYQKKRPKSQVPIDTLPPKPPGFEIPVALNKSTYPHSTFEQVSPTKRKERHGSMDLHKMKKQTREQDFSTSVGCNDENIQTTACSEDQEEDQGTIHLIQVNTELHARCLEFEKTNEELCHKVTELRSKIQDAKIEYNSLLSQVHYQDLMLTCIVDGTPLAG* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1942 484 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN-RELATED 375 470 - -
Amo11g1942 484 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN-RELATED 25 332 - -
Amo11g1942 484 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 375 470 IPR045261 GO:0016887
Amo11g1942 484 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 25 332 IPR045261 GO:0016887
Amo11g1942 484 Pfam Morc6 ribosomal protein S5 domain 2-like 180 316 IPR041006 -
Amo11g1942 484 Coils Coil 438 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1942 Amo-Chr11 102731204 102741957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1942 - - adu:107494710 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1942 11 102731204 102741957 Amo11g1942 11 102731204 102741957 ECH