Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1897 ATGGCTTCCTCTCCTCATTTCGATGATCAAGACTTCGATTTTGAAGGCGGATTTTCCGGAACGCGTTCTGCGGAGAAGAGGCCCTCTCCTGATTATGACGACGAATATTACGATAATGATCCTTTCGCACCCAAGAAGGCAAAATCAAAGGCTGAAGAAGCTGCTTCTGGTGTAACCACTGGAATGATATTGTCTCTTCGTGAGAGTCTTCAAAACTGTAAGGATACCCTACTCACATGCCAAAATGAACTTGAGGCTGCAAAATCTGAAATTCATAAGTGGCGCACAGCTTTTCAGAATGAACCCTTCATACCTTCTGGGACCACTCCAGCACCCAAATTGGCGATTAACTATCTTCAAGCCCTGAAATCTTCTGAGGAGTCTTTAAAAGAGCAGCTTGAAAAAGCAAAAAAAAAGGAAGGTGCATTCTTTGTTACTTTTGCAAAACGAGAACAAGAAATAGCAGAGTTGAAGTCTGCTGTGCGGGATCTGAAAGCTCAACTCAAGCCAGCAACGATGCAGGCAAGGAGGCTGTTACTAGATCCAGCTGTCCATGAAGAGTTTACTCGTTTGAAGAATTTAGTCGAGGAGAAGGATAAAAAAATGAAAGAGTTGCAAGATAACATTGCCGCAATCAATTTCACTCCCCAGAGCAAGATGGGAAAGATGCTTATGGCTAAATGCAAGACTTTGCAGGAGGAAAATGAGGAGATTGGGAACCAAGCGACTGACGCAAAGATACAAGAGTTAGCAATGAAACTATCATTGCAGAAATACCAGAATGCCGAACTGAGAAGTCAATTCGAAGGACTGCAGACACATATGGACGGACTGACAAACGATGTTGAAAGATCCAATGAAATGGTTTTGATGTTGCAAGAGAAATTAGAAGACAAGGATCAAGAGATCCAACGGCTGAAAGATGAATTGCAAGAGAAAGGCTTCATGGATGAAGGGACAACAGAAGCCGCATCTAAAGAGAGATGCCATTAA 993 0.427 MASSPHFDDQDFDFEGGFSGTRSAEKRPSPDYDDEYYDNDPFAPKKAKSKAEEAASGVTTGMILSLRESLQNCKDTLLTCQNELEAAKSEIHKWRTAFQNEPFIPSGTTPAPKLAINYLQALKSSEESLKEQLEKAKKKEGAFFVTFAKREQEIAELKSAVRDLKAQLKPATMQARRLLLDPAVHEEFTRLKNLVEEKDKKMKELQDNIAAINFTPQSKMGKMLMAKCKTLQEENEEIGNQATDAKIQELAMKLSLQKYQNAELRSQFEGLQTHMDGLTNDVERSNEMVLMLQEKLEDKDQEIQRLKDELQEKGFMDEGTTEAASKERCH* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1897 330 MobiDBLite consensus disorder prediction 26 52 - -
Amo11g1897 330 Pfam WTAP/Mum2p family 135 289 IPR033757 GO:0000381|GO:0005634|GO:0080009
Amo11g1897 330 Coils Coil 228 248 - -
Amo11g1897 330 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 320 - -
Amo11g1897 330 Coils Coil 119 142 - -
Amo11g1897 330 MobiDBLite consensus disorder prediction 1 53 - -
Amo11g1897 330 Coils Coil 188 215 - -
Amo11g1897 330 Coils Coil 70 90 - -
Amo11g1897 330 Coils Coil 261 313 - -
Amo11g1897 330 Coils Coil 147 167 - -
Amo11g1897 330 MobiDBLite consensus disorder prediction 307 330 - -
Amo11g1897 330 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 320 IPR033757 GO:0000381|GO:0005634|GO:0080009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1897 Amo-Chr11 99210659 99217301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1897 K22824 - gmx:100776997 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1897 11 99210659 99217301 Amo11g1897 11 99210659 99217301 ECH