Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1893 ATGAAGAAGAAGATGGAAAATCCACCAAGAAGCATGTTGAGGCATGTTCTTGTGGTTTCTCTGGCTTTGAATGTCAGCTTCATACTCAGAATAATGCTTTACCAAACTCAACAAACTCACCACAAATCTCCTTTTTCTATCTCTTCATCATCATCAACAGCAACAAGAAGGTCATTGGTTAATTCAACTCGTTCGGATCGTCCCCCAGACAAAGAGAGACTCATTAATCTCGACCATGGAGATCCTAGAATGTATGAAAGATATTGGAGAAAGAGAGGTGAGAAAACAAGTATCACAATTGCAGGGTGGGAGTCAATGAGCTATTTCTCGCAAGGAGAAAACATTTGTTGGTTCATGGAACCCGAGCTTGCTGAAGAGGTTGTGAGACTTCACAATTTGGTTGGAAATGCAGTGACACAAGGGCGCCATATTGTTGTTGGCACAGGCTCCTCTCAGCTCTTTCTTGCTGCTCTCTATGCTTTGTCTCCCACTCATCATTCTCATCAACCCATTACTATTGTCTCAGCACTACCCTATTACTCGTCGTACCCATCAATGACAGATTACCAGAAATCGGGGCTATACAAATGGGGTGGAGATGCAGAGACTTATGATGATGAGAAAGATGGTGCCTACATAGAGCTGGTAACTTCACCAAATAACCCTGATGGATACACAAGGGAATCAGTGGTCAAGAACAAGAGGCAGGGATTGTTTATTCATGACCTTGCTTATTATTGGCCTCAGTACACTCCCATTTCATACCCTTCAGATCATGACCTCACCCTTTTCACTCTATCAAAAGCCACTGGTCATTCTGGCACTCGCATAGGATGGGCGCTGGTTAAAGACTCTGTGGTGGCGAAGAAGATGACGAAATTTATAGAGCTAAATACGATAGGTGTGTCTAAGGATTCTCAACTGAGAGCTGCTAAGATTTTGGAGACAGTGTCTGACAGCTGTGAAGAAGAAGAATCATTCTTCAAGTATAGCTATGAAATCATGGCTCATAGATGGAGGAAATTGAGAGCAGCAGTTGAGGGTAATGCCTTATTCACTCTGCCTAACTTTTCTCCTGCTTTCTGCAACTTCTTCAATAACTACACTCAACCTCAACCAGCTTTTTTGTGGTTGAAGTGCGAGCGGTTAATAGAGGATTGCGCAAGCTTCCTTAGACAACACAAGATCTTATCAAGAAGTGGGGAGCGTTTTGGGGTTAGCCCAAAATACGTTAGAATTAGCATGCTTGATACAGATGAAAATTTCATGGAGTTTATAGAAAGGTTATCTTCTATACACCTGTAA 1305 0.423 MKKKMENPPRSMLRHVLVVSLALNVSFILRIMLYQTQQTHHKSPFSISSSSSTATRRSLVNSTRSDRPPDKERLINLDHGDPRMYERYWRKRGEKTSITIAGWESMSYFSQGENICWFMEPELAEEVVRLHNLVGNAVTQGRHIVVGTGSSQLFLAALYALSPTHHSHQPITIVSALPYYSSYPSMTDYQKSGLYKWGGDAETYDDEKDGAYIELVTSPNNPDGYTRESVVKNKRQGLFIHDLAYYWPQYTPISYPSDHDLTLFTLSKATGHSGTRIGWALVKDSVVAKKMTKFIELNTIGVSKDSQLRAAKILETVSDSCEEEESFFKYSYEIMAHRWRKLRAAVEGNALFTLPNFSPAFCNFFNNYTQPQPAFLWLKCERLIEDCASFLRQHKILSRSGERFGVSPKYVRISMLDTDENFMEFIERLSSIHL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1893 434 Pfam Allinase 75 432 IPR006948 GO:0016846
Amo11g1893 434 Gene3D - 65 115 IPR037029 GO:0016846
Amo11g1893 434 MobiDBLite consensus disorder prediction 63 77 - -
Amo11g1893 434 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 4 433 - -
Amo11g1893 434 SUPERFAMILY PLP-dependent transferases 71 431 IPR015424 -
Amo11g1893 434 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 433 - -
Amo11g1893 434 Gene3D - 120 325 IPR015421 GO:0003824
Amo11g1893 434 Gene3D Aspartate Aminotransferase, domain 1 326 433 IPR015422 GO:0003824
Amo11g1893 434 MobiDBLite consensus disorder prediction 42 77 - -
Amo11g1893 434 CDD AAT_like 121 429 - -
Amo11g1893 434 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1893 Amo-Chr11 98649140 98662357 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1893 K16903 - gmx:100818522 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1893 11 98649140 98662357 Amo11g1893 11 98649140 98662357 ECH