Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1796 ATGGGAAACCCAAACCCTAACCAGGAGGAAGAGAAGACCCTTCAAGAAGAGCTTTCAGGTCCCATCATGCTCGGCGACCGAGTCATCAAACTCGCTCAGGAGTCCGACTCATCCAAAGTCGACTGCGCCGAACTCGCCAAGAAGGTTCAGCTCCTCTGCGACAACCTCCGCTCCGTCGTCCGTGCCGCCACTGCCCAACCCCTCAACGAGCGTCCCATCCGCCGCATCGTCGCCGAAGTCTCCAAGACCCTCGACCGCACTCTCGCCCTCCTACGCCGCTGCCGCCGCAACGGCGGCGTCCTCCGCCAGGTCTTCTCCATCACCACCACCGCCGATTTCCGCAAGGTCTGGAACCTTCTAGAGTCTTCTAACGGGGACTTGCTCTGGCTCCTCAGCATCTTCGATTCCAAAGGTACCAACCTCTCTCTCCCTCCAATTGCAAGCAATGACCCTATCCTCGCTTGGGTTTGGACCTACACCTATACCCTCCAGTTGGGAACCCTAAAGGACCGTGCTGAAGCTGCAATGGAACTTGGTTCTCTTGCAAGAGACAATGGTCGGAACAAGCTTATTATCTTGGATGAAGGTGGGGTTTCGCCGTTGCTCAAGCTTCTTAAAGAAGGTTCTTCCCCTGATGCTCAGGTAGCTGCTGCTAATGCTCTTGTTAGTATTGCTAGGAACCAAGAGAGGGTTGTTAGGTTCATTGTTGACTCGCTTGGGGTCCCCATTATTGTTCAGGTTCTTGGGGATGCTGCTATGAGGGTTCGTGTCTCCGTGGCRGAATTGGTTGCCACCATGGCTGAGCAGGACCCTCGTGCSCAGGAGGATTTTGTGAGAGCCAATGTGACTAGGCCGCTTGTGTCGTTGTTGTCTATAGATACTGTTCTTGCTGATCCCATGGCAGGGAGGGCTAGCATTCATTCTTTGGTAGTGAATTTGTCGTCGTCATCTTCGATTGGGGAATCGTCTAATTCAGGGAGTTTGGATGGGAGTAGCAGAGGGGGCCAGCATAGGAGGGAGAGGGAGAGGGAGGCTGAGAGCCCTGCGGTGAGGAACGAGGTCAAGGTGAGTTGTGCAAGGGCTCTTTGGAAGCTTTCCATAAGGTGTCTTCTGACTAGCAAGAAAATCACCGAGACCAAAGGTTTGCTTTGTCTGGCTAAGATTATTGAGTCTGAGAGTGGAGAATTGCAGCTCAATTGTCTCATGGCTGTCATGGAGATTACTGCGGTGGCCGAGGTAAATTCTGATCTTAGGAGGGCTGCCTTCAAGTCTACTGCTCCCGCCGCAAAAGCAGTCTTGGATCAGCTTCTGAGAGTGGTTCAGGAAGTGAACCATCCGGCATTGCTGATTCCTGCAATTAAGTCGATTGGTTCCTTAGCCAGGAACTTCCCTGGAAAGGTTCCGCATGTGCTTGGCCCTTTGGTTGCTCAACTTGGTAACAGAGATGTGGATGTGGCTATTGAGGCTGCTATTGCTTTGGGGAAGTTTGCGTGCTCCGAAAACTACAACTGTGTTGATCATTCTAAGGCAATACTTGAGCTTGATGGAGTTCCTAAGCTGATGAGATTGCTGCAGAACAATGACCGTGCGCATATGCATGGCCTTGTTTTACTTTGTCATCTTGCTTTGAATGTGGGCAATAGTAAGGTTCTTGAACAAGAGCGCGCCTTGTGTACTCTAGAGAAGCTAGCCCGTCCTGTTTTAGCTCAGCATCCTGATCAGAAGGATCTCTTCGCAAAAGCCATACACAACCTCACTCTTTATCAGCCGGGAGCTCAATTGCACAGACAGTCCTAG 1797 0.5175 MGNPNPNQEEEKTLQEELSGPIMLGDRVIKLAQESDSSKVDCAELAKKVQLLCDNLRSVVRAATAQPLNERPIRRIVAEVSKTLDRTLALLRRCRRNGGVLRQVFSITTTADFRKVWNLLESSNGDLLWLLSIFDSKGTNLSLPPIASNDPILAWVWTYTYTLQLGTLKDRAEAAMELGSLARDNGRNKLIILDEGGVSPLLKLLKEGSSPDAQVAAANALVSIARNQERVVRFIVDSLGVPIIVQVLGDAAMRVRVSVAELVATMAEQDPRAQEDFVRANVTRPLVSLLSIDTVLADPMAGRASIHSLVVNLSSSSSIGESSNSGSLDGSSRGGQHRREREREAESPAVRNEVKVSCARALWKLSIRCLLTSKKITETKGLLCLAKIIESESGELQLNCLMAVMEITAVAEVNSDLRRAAFKSTAPAAKAVLDQLLRVVQEVNHPALLIPAIKSIGSLARNFPGKVPHVLGPLVAQLGNRDVDVAIEAAIALGKFACSENYNCVDHSKAILELDGVPKLMRLLQNNDRAHMHGLVLLCHLALNVGNSKVLEQERALCTLEKLARPVLAQHPDQKDLFAKAIHNLTLYQPGAQLHRQS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1796 598 MobiDBLite consensus disorder prediction 333 350 - -
Amo11g1796 598 SUPERFAMILY ARM repeat 169 569 IPR016024 -
Amo11g1796 598 MobiDBLite consensus disorder prediction 317 350 - -
Amo11g1796 598 Gene3D - 164 324 IPR011989 -
Amo11g1796 598 Gene3D - 15 133 IPR036537 GO:0007166
Amo11g1796 598 MobiDBLite consensus disorder prediction 317 332 - -
Amo11g1796 598 SMART arm_5 270 367 IPR000225 GO:0005515
Amo11g1796 598 SMART arm_5 184 226 IPR000225 GO:0005515
Amo11g1796 598 SMART arm_5 504 543 IPR000225 GO:0005515
Amo11g1796 598 SMART arm_5 227 268 IPR000225 GO:0005515
Amo11g1796 598 Pfam Armadillo/beta-catenin-like repeat 188 226 IPR000225 GO:0005515
Amo11g1796 598 PANTHER ARMADILLO REPEAT ONLY 4 9 598 - -
Amo11g1796 598 Gene3D - 342 595 IPR011989 -
Amo11g1796 598 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 9 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1796 Amo-Chr11 86495331 86497913 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1796 - - gmx:100813824 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1796 11 86495331 86497913 Amo11g1796 11 86495331 86497913 ECH