Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1680 ATGGCGGATCCGATGCCGGCGCCACCAAGATCTGCCACGGACCTTTTCTCGGATCCGCTGGACTCCCGCCCTCTGTGGTTCAAACCGGCGTCGTTTCTTTCTCCTGACTTCGACTCCGAATCTTACATCTCTGAGCTGCGAACCTTCGTCCCCTTCGACACGCTCCGCTCAGAGCTGAACAGCTACCTCTCCTCCCTCAACCACGAGCTCATCGATCTCATCAACCGCGACTATGCTGACTTTGTTAACCTCAGTACCAAGCTCGTCGACGTCGACGCTGCCGTCGTTCGCATGCGTGCGCCGCTCGTTGAGCTCCGTGAGAAGATCGAGCAGTTCAGGGGATCCGTTGAGGTGTCCCTTGTCGCCATCAAGAACGGTTTGAAGCAGAGATCCGAGGCTGCCGCTGCTAGAGAGACTCTCGAGCTTCTTCTTGACACGTTTCACGTTGTTTCTAAGGTTGAAAAGCTGATAAAGGAGCTGCCTAGTGTACCCACTGATTGGTCGAATGGGGATGGAAGTTTGACAGACAAGAATTCCCTGAGCAATGGAGTTTCTGTGCAGCATGTTGAGAATGGAACAAGTGTTAGAGAGACCCAAAGCATGCTATTGGAGAGAATTGCTAGCGAGATGAACAGGCTAAAATTCTATGTTACACATGCAAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCAAATAGTGGATGCAAGCTTGGGACATTGCTTTGCCGATGGTCTAGAGCACCGGGATGCAACTGCAATCTACAATTGCTTACGTGCATATGCTGCTATTGATAACACCAAGAATGCAGAAGAACTCTTTCGAACCACTATTGTGGCTCCGTTGATACAGAAGATTATACCACACGGGCCATCAGCTTTGGCTGCAGGATCATCCGGAGATGAGCTCGATAATGATTATCAGCAAATTAAGGAGTGCATTGTTAAGGACTGTAAATTTTTATTGGACATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTTTTAGCCAATTCAATCCTCAAGGAGGTTCTCTCTTCCATTCAGAAGGGAAAACCAAGTGCATTTTCTCCTGGAAAACCAGCAGAATTCTTGAAGAATTACAAAGCAAGCTTAGACTTCTTGGCTTATCTAGAAGGCTACTGTCCGTCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATATAGAGTTCATGAAGCAATGGAATATTGGAGTTTATTTCTCTCTGAGGTTTCAGGAAATAGCAAAGTCTTTAGATGATGTGCTTTCAACATCCAGTCTTGTCCCTTTGCAAGACACAGTCTCTGGCAAAGAAAGTCGAGTTTTAACATTAAAACAAAGTGTTACACTGTTGGAGAGTATGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGCTCTGACAAGTTCCTACGCCTATCCTTGCAGCTTCTGTCCAGATACTCAAATTGGCTGTCGTCTGGACTGAATGCCCGCAAGAGCCATAGCACAAACACCAACACTGGGTTTCAATGGGCTGTTTCTGCTGCTATAGATGACTTTATTTATGTAATTCATGATATAAGGTATCTGGAAGAGCATGTTCGTGGAGATTACCTGGAGCACGTGCTTCAGCTCCTATCTTCATGCTCCCCTGATGTTCTTGAATCAGTAAGGCAGAGCATTTTACAAGGTGGTCAATCATTGAAATCTATAGAACCTTTAGTCACCAAAGCAGTAGTGGAGTCACTAGTGGAAAAGTCAGTTGAGGACTTGAGACAGATGAAGGGGATAACAGCAACCTACAGGATGACTAATAAACCTCTACCCGTGAAGCATTCACCCTATGTTGCAGGTGTATTACGTCCCCTAAAGGCTTTTTTGGATGGAGAGCGAGCTACAAGATATTTGACAAGTGAAAGCAGGAATGAAATACTTCTATCTGCTGCTACTGAGATCACTGATCGTTATTATGAATTAGCATCGGACCTTGTCAATGTGGCGAGAAAGACAGAATTTTCTCTGCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCAAGTTCAGATGTCTCAGATAACAATGTGTCTGACACCGGCAAAATTTGCATGCAGCTGTTCCTTGATATTCAGGAATATGCCAGTAACCTCTCCGCATTAGGGGTTGAAGCAGTCAAGATTGCATCCTACCGTTCATTATGGCAGTGTGTGGCTCCTGCTGATGAGCAAAATACAATTTAA 2259 0.4506 MADPMPAPPRSATDLFSDPLDSRPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVEVSLVAIKNGLKQRSEAAAARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDGSLTDKNSLSNGVSVQHVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASQIVDASLGHCFADGLEHRDATAIYNCLRAYAAIDNTKNAEELFRTTIVAPLIQKIIPHGPSALAAGSSGDELDNDYQQIKECIVKDCKFLLDISSAENSGLHVFDFLANSILKEVLSSIQKGKPSAFSPGKPAEFLKNYKASLDFLAYLEGYCPSRSAVAKFRSEAIYIEFMKQWNIGVYFSLRFQEIAKSLDDVLSTSSLVPLQDTVSGKESRVLTLKQSVTLLESMRSCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLNARKSHSTNTNTGFQWAVSAAIDDFIYVIHDIRYLEEHVRGDYLEHVLQLLSSCSPDVLESVRQSILQGGQSLKSIEPLVTKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVKHSPYVAGVLRPLKAFLDGERATRYLTSESRNEILLSAATEITDRYYELASDLVNVARKTEFSLQKIRQSAQRRAGASSDVSDNNVSDTGKICMQLFLDIQEYASNLSALGVEAVKIASYRSLWQCVAPADEQNTI* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1680 752 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Amo11g1680 752 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 7 752 IPR009316 GO:0007030|GO:0015031|GO:0016020
Amo11g1680 752 Pfam COG complex component, COG2, C-terminal 588 716 IPR024603 -
Amo11g1680 752 PANTHER BNAA01G14200D PROTEIN 7 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1680 Amo-Chr11 74132141 74137340 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1680 K20289 - gmx:100817096 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1680 11 74132141 74137340 Amo11g1680 11 74132141 74137340 ECH