Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1656 ATGGGGAGCAGTAGTGCAGCACCGAACTTGGAAGATGTTCCCTCCATGGATCTCATGACGGAGCTCCTCCGTCGTTTCAAGTGTTCCGCTAAGCCTGATAAGCGTCTCATTCTAATTGGCCCACCTGGTTCTGGGAAAGGAACGCAGTCACCAATTATAAAGGATGAGTACTGCTTATGCCACTTAGCCACGGGTGACATGTTAAGAGCTGCTGTTGCGGCTAAAACTCCTCTTGGTATCAAAGCTAAAGAAGCAATGGAAAAGGGAGAGTTGGTTTCAGATGACTTAGTTGTTGGCATTATAGATGAGGCTATGAAAAAACCATCATGTCAAAAAGGTTTTATTCTTGATGGTTTTCCAAGAACAGTTGTCCAAGCACAAAAGCTTGATCAAATGCTGGAAAAACAAGGACTAAAAGTTGACAAGGTGCTCAATTTTGCCATTGATGATTCTATCCTTGAGGAGAGGATAACTGGCCGCTGGATACACCCATCTAGTGGCAGAAGCTACCATACAAAATTTGCTCCTCCTAAAGTTTCGGGGGTTGATGATGTGACTGGCGAACCTCTTATCCAGCGTAAGGATGACACTGCAGCAGTCCTTAAGTCAAGGCTGGATGCATTTCATAAGCAAACTGAACCAGTGATTGATTATTATACAAAGAAAGGGATCGTCGCCAATCTTCATGCTGAGAAACCTCCCAAAGAAGTTACAGTTGAAGTCGAGAAGGTGTTATCTTCATAG 744 0.4395 MGSSSAAPNLEDVPSMDLMTELLRRFKCSAKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDQMLEKQGLKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPKVSGVDDVTGEPLIQRKDDTAAVLKSRLDAFHKQTEPVIDYYTKKGIVANLHAEKPPKEVTVEVEKVLSS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1656 247 Pfam Adenylate kinase, active site lid 160 195 IPR007862 GO:0004017
Amo11g1656 247 Gene3D - 6 246 IPR027417 -
Amo11g1656 247 CDD ADK 35 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 Hamap Adenylate kinase [adk]. 34 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 244 IPR027417 -
Amo11g1656 247 PANTHER NUCLEOTIDE KINASE 11 247 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 ProSitePatterns Adenylate kinase signature. 114 125 IPR033690 -
Amo11g1656 247 Pfam Adenylate kinase 38 223 - -
Amo11g1656 247 TIGRFAM adk: adenylate kinase 35 245 IPR006259 GO:0004017|GO:0005524|GO:0016776
Amo11g1656 247 PANTHER ADENYLATE KINASE 4-LIKE 11 247 - -
Amo11g1656 247 PRINTS Adenylate kinase signature 37 50 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 PRINTS Adenylate kinase signature 65 79 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 PRINTS Adenylate kinase signature 114 130 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 PRINTS Adenylate kinase signature 193 208 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo11g1656 247 PRINTS Adenylate kinase signature 210 224 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1656 Amo-Chr11 72061873 72066323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1656 K00939 - jre:108999611 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1656 11 72061873 72066323 Amo11g1656 11 72061873 72066323 ECH
Amo01g2101 01 62049738 62053913 Amo11g1656 11 72061873 72066323 hybridization