Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1433 ATGAATATGGCATTTCTGAGAACAGTGGCAACTACCACTACCACTGCTATTGCTGCATCTGCTATTCCTGCTGCTTTCGCCTTTTCTTCTCTATCCTCTTCTACTTCTTCTTCTCCTTCTCAATCTTCCAAATCGCCAAACTCACCCTTCTCTCTCAACCCCAACCGATTCGGTCTCTTTAAAACATTTGCTGCCCCGCCCTCCCCTCTCCAAATGGACCACAACACTTCTTCTCAGAACCATCATTCTTCCTTGCCGGAGTTACTGACGGAGTACATGGTGGATATGAAGTGTGAAGGTTGTGTTAATGCTGTTAAAAACAAGTTGCAGACCATCAATGGAGTGAAGGATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGGATTCGTGGTTCAACTCCGGTGAAGACCATGACTGAAGCTTTGGAACAGACTGGTAGAAAAGCCCGATTAATCGGACAGGGAACACCTGAAGACTTCTTAATATCTGCCGCTGTTTCTGAATTCAAAGGTCCAGACATTTTTGGAGTTGTTCGCCTAGCTCAAGTAAACATGGAACTAGCTAGGATTGAAGCCAACTTCAGTGGTTTGTCACCAGGAAAGCATGGTTGGTCCATTAATGAGTATGGGGACCTGACTAGAGGTGCAGCTAGCACTGGTAAAGTATACAATCCAACAGACGGGGAAGATGCTAAACAGCCACTTGGCGACCTGGGAACATTAGAAGCTAACGAAAAGGGCGAAGCCTTCTACACTGGAGTCAAAGAAAAGCTCAAGGTAGGTGATCTTATTGGACGATCAGTGGTTGTATATGCAACTGAAAACAAATCAGAACATGGTATAGCTGCTGCTGTAATCGCCAGAAGTGCAGGGGTGGGAGAGAACTACAAAAAACTCTGTACGTGTGATGGCACCACCATTTGGGAGGCAAGTGACAGAGATTTTGTCACAAGCAAGGTCTGA 963 0.4569 MNMAFLRTVATTTTTAIAASAIPAAFAFSSLSSSTSSSPSQSSKSPNSPFSLNPNRFGLFKTFAAPPSPLQMDHNTSSQNHHSSLPELLTEYMVDMKCEGCVNAVKNKLQTINGVKDVEVDLSNQVVRIRGSTPVKTMTEALEQTGRKARLIGQGTPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEYGDLTRGAASTGKVYNPTDGEDAKQPLGDLGTLEANEKGEAFYTGVKEKLKVGDLIGRSVVVYATENKSEHGIAAAVIARSAGVGENYKKLCTCDGTTIWEASDRDFVTSKV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1433 320 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 15 320 - -
Amo11g1433 320 Pfam Copper/zinc superoxide dismutase (SODC) 176 279 IPR001424 GO:0006801|GO:0046872
Amo11g1433 320 Pfam Heavy-metal-associated domain 92 148 IPR006121 GO:0046872
Amo11g1433 320 Gene3D Superoxide dismutase, copper/zinc binding domain 159 288 IPR036423 GO:0006801|GO:0046872
Amo11g1433 320 Gene3D - 75 158 - -
Amo11g1433 320 SUPERFAMILY Cu,Zn superoxide dismutase-like 155 312 IPR036423 GO:0006801|GO:0046872
Amo11g1433 320 SUPERFAMILY HMA, heavy metal-associated domain 89 152 IPR036163 GO:0046872
Amo11g1433 320 CDD HMA 91 150 IPR006121 GO:0046872
Amo11g1433 320 ProSiteProfiles Heavy-metal-associated domain profile. 88 151 IPR006121 GO:0046872
Amo11g1433 320 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 15 320 IPR024134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1433 Amo-Chr11 52862785 52866801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1433 K04569 - gmx:547617 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1433 11 52862785 52866801 Amo11g1433 11 52862785 52866801 ECH