Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1427 ATGGCCTTGTCTCGCTTCCTTACCATGTTTCTCATCGTAGCTGTTTCCATTATTCCTATTATTTCTTCAACTGACTTCATTGTCGGTGATGACAATGGTTGGGCCACTGGCTTTGACTATCAAGCTTGGGCTCAGGGAAAGGAATTCCATGCTGGAGATAAGCTTGTATTCAAGTACATGAAAGGAAAGCACAATGTGATGAGAGTGAATGGTACTGGCTTCCAACAATGTGCTGTGCCACCAGATTCATCAACTCAAGGCTTTACCACTGGAAATGATGTGATTGTTCTTTCATCCCCAGGAAGAAAATGGTATATTTGTGGTATTAGCAACCATTGTGAGAATGGTAAAATGAAGGTTGCAATAACTGTTCAACCTCAAATTGGATTTGGGGCACCAACATCTTCTCCCAACCCGACCCCAACCCCAATTTCCGCTGCAACAGGAACCTCTCCTATTTATTCTTCTTGGATAGTGATAATTTTTGCTCTCCTCATAGCAATTATGTTCTAG 513 0.4211 MALSRFLTMFLIVAVSIIPIISSTDFIVGDDNGWATGFDYQAWAQGKEFHAGDKLVFKYMKGKHNVMRVNGTGFQQCAVPPDSSTQGFTTGNDVIVLSSPGRKWYICGISNHCENGKMKVAITVQPQIGFGAPTSSPNPTPTPISAATGTSPIYSSWIVIIFALLIAIMF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1427 170 Gene3D - 23 129 IPR008972 -
Amo11g1427 170 PANTHER BLUE COPPER PROTEIN 6 135 IPR039391 GO:0009055
Amo11g1427 170 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Amo11g1427 170 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Amo11g1427 170 CDD Phytocyanin 24 124 - -
Amo11g1427 170 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Amo11g1427 170 PANTHER BLUE COPPER PROTEIN-LIKE 6 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1427 Amo-Chr11 52486156 52487012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1427 1 142 Miscellaneous Gene Families AT2G32300 33.566 5.27e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1427 - - adu:107487489 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1427 11 52486156 52487012 Amo11g1427 11 52486156 52487012 ECH