Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1362 GAAGGGATTTATTTTATTTGTTTAACAATGCGAGTGAAGGAAATGCACCCGTTGTGTTGCATCTCGCTGGAGAGTCCAGGGATCGGTGGCGGAGGTGACTCGCCGGAGGCGGCAGACGCGGCGGCGCTGTCGAGGACCAGGAGTCTGCCGGCGAGTTTCGCAGCGGCGGGTGGCGGATCTGATGGAGGAGGATGTTGTGGACCGGAGGAGACGGTGGCGGGAGTACTGTACAAATGGACGAATTACGGCAAGGGCTGGAGATCCCGGTGGTTCGTCCTCCGCAACGGCGTCCTCTCCTACGCTAAGATCCGGTGGCCTGAGTATCTCAACCTCCTCCCTCGTCTTGACGACGTCCACCTCATCGGCGAAGTCTCCGCCAACCGCCTCGCTCGCTTCGACCGCGGTGCCGCCGCTGCTTCCTCCATCCGCCGCAAGAGCCACAAACCTCCCTCTTCCTCCGGCGTTGTCCATCTCAAGATCTCGTCATTTAGAGAGAGTAAGTCAGATGATAGGAGGTTCTATATATTCACAGCAACGAAGACTCTCCATCTGAGAACCGATTCGAGGAGGGACCGTGTGGCTTGGATACAGGCTTTGGTGTCAACCCGTGGCTTGTATCCATCACTTAGACCACTCATTAGTGATCACATCATATCTTCTCTCGCACCAAACCATGTGTCTGTGTCGACCGAGAGGCTCAAGAAACGGTTGCTTGAAGAAGGTACCAGTGAGACCCTCGTGAAGGACTGTGAGCAAATCATGCTCTCCGAGTTCAACGAGTTACAAGGGCAGCTTAAAATCCTGTGCCAAGAGAGATTGAACTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATATTGAACCTGAGGCCTCTGCCATACATGATGGTGAATACCAATTGACAAAGAATGGATTTTCAAGTCTAGGACGCGCAAAATATAGCGAATGCAGTACAACTGAATCGTCTGATGATATCGAGAAGCAGGAGTTGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAATAGGAACTTTGGACCAAGTGAACGGGTCTAAAGAAGCAAACACAGAATGTATTGATATGGAAAACATTAGTATTGAGAAGGCAATCAATAGTTTCAGATACCCTCACATAGTTAGGAGGAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGCGTAAGTTTATGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGAGTTTGTCTTCCTGTGTACTTTAATGAACCAATATCGTCACTTCAGAAGTGTTTCGAGGACTTGGAGTACTCTTACCTTCTGGACCGAGCTTATGAATATGGAAAATCAGGAAACAGTCTCCTTAGGGCACTGAATGTTGCCGCATTTGCAGTTTCTGGATATGCCTCATCTGAAGGGCGTCATTGTAAACCCTTTAATCCTTTGTTAGGGGAAACTTATGAGGCTGACTTTCCTGACAAAGGACTTCGCTTCTTTTCTGAGAAGGTTAGCCACCATCCAACTGTAGTTGCGTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGAAGGTCCATTCAACTTGACCCGGTGGGAGTTCTTACCCTTCAGTTTGATGACGGTGAAACATTTCACTGGAGCAAGGTGACGACAACAATTTATAATCTTATCCTTGGAAAAATATATTGTGATCATCATGGGAACATGGACATTCGTGGCAATCGCCAGTATTCAATCAGACTCAAGTTCAAAGAACAGACGATTCTGGACCGAAATCCTCATCAGGTGAATGGATTTGTTGAAGATTTAAGGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTACTATGTTAATGGTGATGTGAATGTGAAGCCAAAAGGTTTCAATTCGTCAGATTCAACCTTGTTGTGGAAAAGGGTTATGCCACCCACTAATCTCACTCGGTACAATTTGACATCATTTGCCATCACACTCAACGAGCTTACACCAGGACTCAAGGAGAAACTCCCGCCCACTGATTCCAGGCTGAGGCCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCACGAAAAATACAAGAAAGTGGTTGGAAGCCGAAATGGTTCCACCAAGAAGGTGAAAATGGAACATTTCGATATATTGGCGGGTATTGGGAAACGAGAGCTCAAGGAAAATGGGATGGATGCCCAGATATATTTGGTGAATTTAATGAAGTCACTGGGGAACCATTGGATGCGTCTTGA 2376 0.4684 EGIYFICLTMRVKEMHPLCCISLESPGIGGGGDSPEAADAAALSRTRSLPASFAAAGGGSDGGGCCGPEETVAGVLYKWTNYGKGWRSRWFVLRNGVLSYAKIRWPEYLNLLPRLDDVHLIGEVSANRLARFDRGAAAASSIRRKSHKPPSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRRDRVAWIQALVSTRGLYPSLRPLISDHIISSLAPNHVSVSTERLKKRLLEEGTSETLVKDCEQIMLSEFNELQGQLKILCQERLNLLDTIRQLEAANIEPEASAIHDGEYQLTKNGFSSLGRAKYSECSTTESSDDIEKQELEEVSDEDEISYYDTREYFTEPGFRCGSIGTLDQVNGSKEANTECIDMENISIEKAINSFRYPHIVRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGLRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLQFDDGETFHWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSIRLKFKEQTILDRNPHQVNGFVEDLRGKKVATLFGKWDDSMYYVNGDVNVKPKGFNSSDSTLLWKRVMPPTNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQESGWKPKWFHQEGENGTFRYIGGYWETRAQGKWDGCPDIFGEFNEVTGEPLDAS* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1362 791 Pfam Oxysterol-binding protein 412 765 IPR000648 GO:0008289
Amo11g1362 791 SUPERFAMILY PH domain-like 70 201 - -
Amo11g1362 791 Pfam Pleckstrin homology domain 74 199 - -
Amo11g1362 791 Gene3D - 498 670 - -
Amo11g1362 791 Coils Coil 709 729 - -
Amo11g1362 791 SUPERFAMILY Oxysterol-binding protein-like 407 781 IPR037239 -
Amo11g1362 791 ProSiteProfiles PH domain profile. 69 204 IPR001849 -
Amo11g1362 791 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 13 782 - -
Amo11g1362 791 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 13 782 IPR000648 GO:0008289
Amo11g1362 791 Gene3D - 67 204 IPR011993 -
Amo11g1362 791 SMART PH_update 70 206 IPR001849 -
Amo11g1362 791 Gene3D - 708 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1362 Amo-Chr11 48115967 48127654 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1362 K20456 - gmx:100793692 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1362 11 48115967 48127654 Amo11g1362 11 48115967 48127654 ECH