Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1350 ATGGCCTTCAAACCATGTTCCTCTAATAATATTGCTCTTTTCTTCACACTCAACCTCCTCTTCTTTGCACTTGTCTCTGGATGTGGCTACAAATGCCCTAACCCTAAACCTAAGCCGAATCCAAACCCTAACCCTAATAATCCAAATCCCAACCCCAACAACCCAAATAATCCCAATCCTAACCCCAATAATCCAAACCCCAATCCCAACCCCAACAATCCAAACCCTAACCCTAACCCAAACAACCCTAACAATAACATGACATGCCCACGCGACGCGCTCAAATTGGGCATATGCGCCAATGTGCTGAGCGGTTTGTTGAACATAACTTTGGGTCAGCCGCCGGTGACCCCCTGCTGCTCCCTCCTCAGCGGTCTCGTCGATCTCGAAGCCGCAATTTGCCTTTGCACGGCGCTTAGAGGAAACATCCTTGGCATTAACATCAACCTTCCAATCTCCCTTAGCCTGCTTCTGAATGTCTGCTCAAGGCAAGTGCCACTGTGGTGTGGTGTGTATTAA 519 0.4855 MAFKPCSSNNIALFFTLNLLFFALVSGCGYKCPNPKPKPNPNPNPNNPNPNPNNPNNPNPNPNNPNPNPNPNNPNPNPNPNNPNNNMTCPRDALKLGICANVLSGLLNITLGQPPVTPCCSLLSGLVDLEAAICLCTALRGNILGININLPISLSLLLNVCSRQVPLWCGVY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1350 172 PANTHER LIPID TRANSFER PROTEIN EARLI 1-RELATED 6 166 - -
Amo11g1350 172 Pfam Hydrophobic seed protein 88 166 IPR027923 -
Amo11g1350 172 MobiDBLite consensus disorder prediction 38 87 - -
Amo11g1350 172 Gene3D - 82 169 IPR036312 -
Amo11g1350 172 MobiDBLite consensus disorder prediction 38 83 - -
Amo11g1350 172 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Amo11g1350 172 PANTHER - 6 166 - -
Amo11g1350 172 SMART aai_6 89 169 IPR016140 -
Amo11g1350 172 CDD HPS_like 88 166 IPR027923 -
Amo11g1350 172 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 91 167 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1350 Amo-Chr11 47107677 47108531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1350 79 169 Acyl Lipid Metabolism Gene Families AT4G22490 38.462 4.59e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1350 - - gmx:100499716 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1350 11 47107677 47108531 Amo11g1350 11 47107677 47108531 ECH