Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1333 ATGGAAGCCCTGGCGGAGCTTGAACGAGTTCAAACCCAGCTCCTGAAACGCATATCGGAGTTAGAAAAACAAAACCAAAACCACTCCACTCCATCAACTGATTCTCCCATCGTTGACGAAGCTGACACCGTTACTCGTCTTTCCTCCATTTTGCGCTCTAACGCCGTTAACGACTTTTCCTTCAAGAGGGTCCCACCTGATTACTACGACTGGTCTCTTGAAGCTCGACGCGATGCCCTCGCTGCTCACTCCATCCACCATCTCTGCAAAAGCATCGTTTTGGTTAACACGCAAGCGCCCGCTAATGTCGTTGATTGTAGCGATCGCAAAAACTCCAAGTATTATGTTGTTGTGGTTCAGTACACAGCGCGGTTCAATGCCGAGGCTGTCAAGAATTTTCTGTATTCGCTCAACAATGGAAGCATAGCGAAGAAGAAATTCAACATGAGGCTGGCTCCTGAGCAGACATCCACAGACTTAACTGGATATGGGCACAATGCAGTGACTTGTATTGGCATGAAAACTGACATTCCGGTGATTTTGGATGAAGCTATCGTAAAACTGACCCCAGATTTCTTCTGGTTGGGTGGCGGTGAGGTTGATCTTAAGCTTGGAATAAGGACCTCTCAGTTAATCAGATTTGTCAACCCCTTCATTGTCAACTGTAGCGGTAGTTGA 678 0.4705 MEALAELERVQTQLLKRISELEKQNQNHSTPSTDSPIVDEADTVTRLSSILRSNAVNDFSFKRVPPDYYDWSLEARRDALAAHSIHHLCKSIVLVNTQAPANVVDCSDRKNSKYYVVVVQYTARFNAEAVKNFLYSLNNGSIAKKKFNMRLAPEQTSTDLTGYGHNAVTCIGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIRFVNPFIVNCSGS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1333 225 CDD YbaK_like 72 220 - -
Amo11g1333 225 PANTHER YBAK/AMINOACYL-TRNA SYNTHETASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1 223 - -
Amo11g1333 225 Pfam Aminoacyl-tRNA editing domain 86 214 IPR007214 GO:0002161
Amo11g1333 225 Gene3D - 45 223 IPR036754 GO:0002161
Amo11g1333 225 Coils Coil 4 24 - -
Amo11g1333 225 PANTHER UNCHARACTERIZED 1 223 - -
Amo11g1333 225 SUPERFAMILY YbaK/ProRS associated domain 60 222 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1333 Amo-Chr11 46237634 46239497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1333 - - gmx:100815424 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1333 11 46237634 46239497 Amo11g1333 11 46237634 46239497 ECH