Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1327 ATGGGAACTCGATCGAATTTCTACAAGAACCCATCCATCTCTTACAACAAACACTTCAGTCTCTCTTCCGTTCTTCAGAACCTACAAGCTTACAATACCGCCACCGGCAACGCTCCTCCATCCGATGAACTGCCATCTATTTCCGCCACTTCCTCCGTCGAAAATACTCGCTCCCTCAAACGCCACCGCGATCCCAAGCCTCCGAAATCCCAGCCCGATTGCGATGTACCTAGCTCCATGTCACACCGCGATTACGTCCAAAAAAGAAGGGACGAAGTTGATTCGTCTCGAAATTGCGATCGTGTAGAATTGACTGAAGATGTGTTGTTGCACTGCCGGGGAAACCCTAACTCTGCTGTAGCCTTGGTGGATTATGCTAGTGATGAAGGTAGCCCTTCAGACCGTCAAGAAGCACACACTCCTCCCGATACTACTGACCAAGAAAAAGAATTTCATGGAATTAAAAGCAGAAGTGAGCAGCGCTTTCCTGTCAGTGGAGAACCTATTTGTCTCATATGTGGCAGATACGGAGAATACATATGCAATGAGACAAATGATGATGTCTGTAGCATGGAGTGCAAAAAGGAGCTTTTGGAAACTCTGAAATTGAATGAGGGATCCTCCCATATCCAAGTCAGACATTTCTCCTCATCTGGAATTAGTAATGTATCGCTGGAGCCTGTATTTAGTGATGATAACTGGGATTATGATCGGCATCGCTGGACAAAAAAGAGATCTAGCCTTTCAACATATGAATGTTGGAAATGTCATAGACCTGGGCACCTAGCTGAAGACTGTCTAGTAAAGAGTTGTAGCCAGATCACACCATCAAGTAATAGATCTAGTTCCATTCCCAAGGATCTTCTTGGACTGTATAGAAGATGCCATCAAATTGGCAGAGACTTGTTGGCTGCAAACTGTAATGTGTGCCGTAACTCATCAAATTTGGCTACTTGCCTTGATTGTAGTGTAGTCCTTTGTGACCGGGCAGGACACTTGGATGAACATATAAAGACACACCCATCTCATCAAAAGTGTTACTCACACAAGCTAAAACGTCTGGTAAAATGCTGCAAGTCAACATGCAATGTCACTGACATCAAGGATCTTTTGATTTGCCACTACTGCTTTGATAAAGCCTTTGAAAAGTTCTATGACATGTATACCGCAATGTGGAAGGAGGCTGGGCTTTCAATCATATGGGGTTCTATATGCTGTGAAGATCACTTCACCTGGCACAGGATGAATTGTTTGAATGCAGATGTGGAAGTTAATGCATATATTTTTAAAAATGACGGTCTAAGAGGTAAACCTAGGCAACTTAGTGACTTCATTTTTTGA 1341 0.4355 MGTRSNFYKNPSISYNKHFSLSSVLQNLQAYNTATGNAPPSDELPSISATSSVENTRSLKRHRDPKPPKSQPDCDVPSSMSHRDYVQKRRDEVDSSRNCDRVELTEDVLLHCRGNPNSAVALVDYASDEGSPSDRQEAHTPPDTTDQEKEFHGIKSRSEQRFPVSGEPICLICGRYGEYICNETNDDVCSMECKKELLETLKLNEGSSHIQVRHFSSSGISNVSLEPVFSDDNWDYDRHRWTKKRSSLSTYECWKCHRPGHLAEDCLVKSCSQITPSSNRSSSIPKDLLGLYRRCHQIGRDLLAANCNVCRNSSNLATCLDCSVVLCDRAGHLDEHIKTHPSHQKCYSHKLKRLVKCCKSTCNVTDIKDLLICHYCFDKAFEKFYDMYTAMWKEAGLSIIWGSICCEDHFTWHRMNCLNADVEVNAYIFKNDGLRGKPRQLSDFIF* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1327 446 MobiDBLite consensus disorder prediction 130 157 - -
Amo11g1327 446 MobiDBLite consensus disorder prediction 82 97 - -
Amo11g1327 446 MobiDBLite consensus disorder prediction 33 97 - -
Amo11g1327 446 MobiDBLite consensus disorder prediction 127 160 - -
Amo11g1327 446 MobiDBLite consensus disorder prediction 33 55 - -
Amo11g1327 446 ProSiteProfiles Zinc finger CCHC-type profile. 253 266 IPR001878 GO:0003676|GO:0008270
Amo11g1327 446 Gene3D - 246 293 - -
Amo11g1327 446 MobiDBLite consensus disorder prediction 56 70 - -
Amo11g1327 446 SUPERFAMILY Retrovirus zinc finger-like domains 237 266 IPR036875 GO:0003676|GO:0008270
Amo11g1327 446 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 446 - -
Amo11g1327 446 Pfam HIT zinc finger 168 195 IPR007529 -
Amo11g1327 446 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 446 - -
Amo11g1327 446 Gene3D - 152 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1327 Amo-Chr11 46000359 46007486 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1327 - - gmx:100814892 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1327 11 46000359 46007486 Amo11g1327 11 46000359 46007486 ECH