Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0860 ATGGCTCTTCGAATTCCCTGTAACTGCTGCATTCCATTCTCAAACCACCAATCTTCTGCTTCTAACGCTTTCTACACCGCTGCTTTCACAAACCGCCGCAAGTCCACCTCGGCGGCGAGGGCGGAGCTCCGGACGCAGGTGGATGTGACCCCCCCAACTGCTTACTCGTCACCGTCCGGTGAGGTTCCTACTCACAAGGTCACCGTCCATGATACACAAAGAGGAATCGTTCACGAGTTCGTGGTTCCTGAGGATCAGTATATATTACACACTGCTGAATCTCAGAACATTACCCTTCCGTTTGCCTGCAGACATGGTTGTTGTACTAGCTGTGCTGTACGTATAAAGAATGGACAGATTAGACAGCCAGAGGCACTTGGGATATCTGCTGAATTGAAAGAAAAGGGCTATGCACTTCTTTGTGTGGGGTTCCCATCCACGGACGTTGAAGTAGAAACGCAAGATGAAGATGAGGTATATTGGCTTCAGTTCGGACGGTATTTCGCCCGAGGACCAGTGGAGAGAGATGACTATGCCTTGGAGTTGGCCATGGGCGACGAGTAA 564 0.5053 MALRIPCNCCIPFSNHQSSASNAFYTAAFTNRRKSTSAARAELRTQVDVTPPTAYSSPSGEVPTHKVTVHDTQRGIVHEFVVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKNGQIRQPEALGISAELKEKGYALLCVGFPSTDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMGDE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0860 187 Pfam 2Fe-2S iron-sulfur cluster binding domain 75 143 IPR001041 GO:0051536
Amo11g0860 187 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 65 157 IPR001041 GO:0051536
Amo11g0860 187 PANTHER FERREDOXIN 18 172 - -
Amo11g0860 187 CDD fer2 67 152 IPR001041 GO:0051536
Amo11g0860 187 PANTHER FERREDOXIN C 2, CHLOROPLASTIC 18 172 - -
Amo11g0860 187 Gene3D - 62 167 IPR012675 -
Amo11g0860 187 SUPERFAMILY 2Fe-2S ferredoxin-like 55 165 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0860 Amo-Chr11 20416659 20421700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0860 K02639 - gmx:100791128 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0860 11 20416659 20421700 Amo11g0860 11 20416659 20421700 ECH