Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0519 ATGTTTTGTTTTGTGTCACAAGAGCAGATCCAGGTTACAATTGATGTTCCTAGTCCAACAACAGGCATAATTCTAAAGCTTGTAGTCAACGAAGGTGATACAGTTAAACCAGGTCACAAGGTAGCTATTATTTCAACTTCTGCTGAAGTGATAGAGCAGGATTCGTCGTCGTCGTCGTCTTCTTCATCTTCATCTTCATCTTCATCTTCATCTGAGAGTGAATCCGAAGAAGATTCTCCTCAACCAGGCCAAAAGATCAGTGAGAAGAAAAAAGCACCTAATGTTGAGGCTACACCTAAAAGAATTGAGACTTCAGTTACCACTAAGGAAAGTCCTAAAGCAAACATTGCTCCACAACTTCCACCCAACAAAGGAGAAAGACGAGTTCCCATGACAAGACTTCGAAAGCGAGTTATGACACGGTTGAAGGATTCACAAAACACATATGCAATGCTAACAACTTTCAATGAACTTGACATGACTAATCTGATGAAGCTTCGTTCTGATTACAAGGAAGTATTTGTTGAAAAGCATGGAGTCAAATTGGGACTTATGTCTTGTTTTATCAAAGCTGCTATTAGTGCACTCCAACATCAGCCAATTGTAAATGCAGTCATTGATGGTGATGATATTGTATACAGAGATTATATAGATATCAGTGTAGCTGTTGCTACTGCAAAGGGACTTGTTGTGCCAGTTATCCGCAATGCTGAGAAAATGAAGTTGGCAGAGATAGAAAATCATATTAGCTCTTTTGGAAAGAAGGCAAACAATGGAACTTTATCAATTGATGAGATGGTTGGAGGCACACTTACAATATCCAATGGTGGTGTTTATGGGAGCCTCTTGAGTACCCCTATTATTAACCCTCCTCAGTCAGCAATCTTGGGTATGCATTCCATCATGAGTCGTCCAATGATGGTTGGGGGTAATATCGTCCCAAGGCCAATGATGTACATTGCTCTAACATATGATCATAGAATCATTGATGGAAGAGAAGCAGTTTATTTTCTACGTCACATCAAGGATATTGTGGAGGATCCTCGTAGATTGCTACTTGACTTYTGA 1068 0.3979 MFCFVSQEQIQVTIDVPSPTTGIILKLVVNEGDTVKPGHKVAIISTSAEVIEQDSSSSSSSSSSSSSSSSSESESEEDSPQPGQKISEKKKAPNVEATPKRIETSVTTKESPKANIAPQLPPNKGERRVPMTRLRKRVMTRLKDSQNTYAMLTTFNELDMTNLMKLRSDYKEVFVEKHGVKLGLMSCFIKAAISALQHQPIVNAVIDGDDIVYRDYIDISVAVATAKGLVVPVIRNAEKMKLAEIENHISSFGKKANNGTLSIDEMVGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIMSRPMMVGGNIVPRPMMYIALTYDHRIIDGREAVYFLRHIKDIVEDPRRLLLDF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0519 355 Gene3D - 111 351 IPR023213 -
Amo11g0519 355 Gene3D - 4 70 - -
Amo11g0519 355 MobiDBLite consensus disorder prediction 50 77 - -
Amo11g0519 355 SUPERFAMILY CoA-dependent acyltransferases 125 354 - -
Amo11g0519 355 MobiDBLite consensus disorder prediction 100 114 - -
Amo11g0519 355 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 10 354 - -
Amo11g0519 355 SUPERFAMILY Single hybrid motif 11 58 IPR011053 -
Amo11g0519 355 CDD lipoyl_domain 12 44 - -
Amo11g0519 355 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 10 354 - -
Amo11g0519 355 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 124 353 IPR001078 GO:0016746
Amo11g0519 355 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 8 354 IPR006255 GO:0004149|GO:0006099|GO:0045252
Amo11g0519 355 MobiDBLite consensus disorder prediction 50 128 - -
Amo11g0519 355 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0519 Amo-Chr11 9019730 9025544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0519 129 353 Acyl Lipid Metabolism Gene Families AT1G54220 31.304 4.99e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0519 K00658 - gmx:100813488 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0519 11 9019730 9025544 Amo11g0519 11 9019730 9025544 ECH