Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0482 ATGCAGGTGCCAGAAGCAGTAACGGAGAAGAGGTCAAGTGCATACAACAAAGGGAGAGTGTTCATCCATGGAGCCAATGAGATAACAGCCATTGCATACAAGAAACAGTTCCAAACAGACTTGGCAGCGTTCCTGAGGTCAAGATCTGTGGAGATGAAGAGAGGTGGGTCCATGTTCTTGGTTTGCTTGGGCAGAACATCTCTGGACCCCACCGACCAGGGTGGTGCTGGTCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCTTCAGGGGTTAATTAGCAGTGAGAAACGTGACAGTTTCAACATTCCAGTTTATGCACCAAGCCTACAAGACTTCAAGGAGGTGGTTGAAGGCGACGGGTCATTCGCCATCCACAAGCTGGAGGTTTTCAAAGGAGGAAGCCCTCTTGTGGTTGACCAACCGGACAACGCCAGCCAAGTCGGAAAGGCCCTGGCCAACACCTGCCGGAGTGTCTCCGGCGTCCTTGTTGACGCCCACATCGGAGAAGACCTTAGCCACGAGCTCTTTCTTAGAGTGGAGCACAGAGCTACCTGCCATGGCAAAGACTTGTTAGAACAACTTCAGTTCTATCACATAGTTGCATCCCTTTCTTTTGTTCAATCATAA 642 0.5047 MQVPEAVTEKRSSAYNKGRVFIHGANEITAIAYKKQFQTDLAAFLRSRSVEMKRGGSMFLVCLGRTSLDPTDQGGAGLLFGTHFQDAWDDLVLQGLISSEKRDSFNIPVYAPSLQDFKEVVEGDGSFAIHKLEVFKGGSPLVVDQPDNASQVGKALANTCRSVSGVLVDAHIGEDLSHELFLRVEHRATCHGKDLLEQLQFYHIVASLSFVQS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0482 213 Gene3D Vaccinia Virus protein VP39 33 138 IPR029063 -
Amo11g0482 213 Gene3D - 2 189 IPR042086 -
Amo11g0482 213 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 210 IPR005299 GO:0008168
Amo11g0482 213 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 2 210 - -
Amo11g0482 213 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 209 IPR029063 -
Amo11g0482 213 Pfam SAM dependent carboxyl methyltransferase 2 208 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0482 Amo-Chr11 8336109 8341422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0482 K18848 - gmx:100801476 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0482 11 8336109 8341422 Amo11g0482 11 8336109 8341422 ECH