Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0459 ATGGCACCCTTTATTCTTTTGGTGCTTGTATCCCTTCTATTTGTTCCAACAAGTTCTTATGTTCAACAAACTAAAGAGGGTTTCATCTCTGGAGTTATATCTGACAAGGGTCTTGATTTTGCAAAGGATATACTAATAGAACAAGGTATTGCCTCCATTGTTCAGCTTCAGCTGCCAGAGATTGAGAAATCTGTTCAAGTCCCTTTCATTGGAAATGCTAAAGTGATTCTTTCTGAGATCACGATCAAGGATATTCAAGTAAATTCATCTTCTGTTGTGAGTGGAGAGAGTGGAATCTTTCTAGTTGTTTCTGGTGCCACTGCGGATTTGGCTATGAAGTGGAGGTATTCATGTAGCAGTTGGTTAATCCCAATTGGGATTTCGGATAGTGGAAATGCAACTGTGAAGGTTAAAGGTATGCAAGTGGGGCTTACAGTAGATTTAAGGAATGAAGAAGGAACTCTTAAGTTGATTCTCTTAGATTATGGATGTTATGTTGGAGATTTGTCTATAAAGTTGGAAGGTGGAGCATCTTGGCTGTACCAAGTCTTAGTGGATGCTTTTCAAGGGAACATAGCATCTGCAGTTGAAGATGGCATTTCAGATAAAGTAAGTGAAGGCATAGGGAAGCTTGACACTTTATTGCAGTCTCTTCCAAAGCAAATCTCTGTGGACAACTTTGCGGAGCTAAATGTTTCTTTCGTTGGCAATCCTGTCCTGAGTAGTACTTCAATTGCGATTGCGATTAACGGCTTATTCACAGAGAGAAATGTCTTTTTAGTACCTCAACGTTACCGAAAAAGATTACAGGTTTCTTCTGCATGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATCCATGAAAATGTGTTCAGATCTGCTTCTCTAGTTTACTTCAGGGAAGGTAGTATGCAAATGATTATTGATGAACTACCTAATCAAGCCATTTTGAACACTGCTGAATGGAGATTCATAGTTCCTCAACTATACAAAAAGTATCCGAATGACGACATGCAGCTTAATATATCTGCATCTTCTCCCCCAGTGATACTAGTGGATAACCAAGATATTCGTGCGTCTGTTTTAGTAGACATAACGATTGATGTTCTTGAAGCTGGTGAAGTCATACCTGTTGCCTGCATCTCAGTGGATATTAGTGCTTCGTGTTCTGTGGACATTATACGAAACAAAATCAATGGTAGGCTCAAATTGGAAGAGTTTTCTGCATACCTGAAATGGAGCAAAATAGGAAAATTGCACATAAGTCTGATTCAGTCATTAATATCAACGGCTCTGAAAACCGTTGTCATACCGTACCTTAACTTGGAACTGAAGAAAGGATTAGCACTGCCAACCATTGATGGTTTTGCCTTTCAGAATGCAAATATCTTGTACCTTCCTCCATGGATTGCAGTGTGTACTGATGTTTCTTACTTAGAAGACTACTATCTCACTCAGCATTCAGCTTATGTATCATAA 1479 0.3901 MAPFILLVLVSLLFVPTSSYVQQTKEGFISGVISDKGLDFAKDILIEQGIASIVQLQLPEIEKSVQVPFIGNAKVILSEITIKDIQVNSSSVVSGESGIFLVVSGATADLAMKWRYSCSSWLIPIGISDSGNATVKVKGMQVGLTVDLRNEEGTLKLILLDYGCYVGDLSIKLEGGASWLYQVLVDAFQGNIASAVEDGISDKVSEGIGKLDTLLQSLPKQISVDNFAELNVSFVGNPVLSSTSIAIAINGLFTERNVFLVPQRYRKRLQVSSACGGLPKMIKVSIHENVFRSASLVYFREGSMQMIIDELPNQAILNTAEWRFIVPQLYKKYPNDDMQLNISASSPPVILVDNQDIRASVLVDITIDVLEAGEVIPVACISVDISASCSVDIIRNKINGRLKLEEFSAYLKWSKIGKLHISLIQSLISTALKTVVIPYLNLELKKGLALPTIDGFAFQNANILYLPPWIAVCTDVSYLEDYYLTQHSAYVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0459 492 SMART bpi2_2 276 474 IPR001124 GO:0008289
Amo11g0459 492 Gene3D - 32 463 - -
Amo11g0459 492 PANTHER OS06G0309200 PROTEIN 1 492 IPR045897 -
Amo11g0459 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 478 IPR017943 GO:0008289
Amo11g0459 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 241 IPR017943 GO:0008289
Amo11g0459 492 PIRSF Lipid_binding_protein 3 482 IPR030675 GO:0005615|GO:0008289
Amo11g0459 492 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 492 - -
Amo11g0459 492 Pfam LBP / BPI / CETP family, C-terminal domain 280 478 IPR001124 GO:0008289
Amo11g0459 492 Gene3D - 36 216 - -
Amo11g0459 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 210 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0459 Amo-Chr11 7923715 7929977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0459 K05399 - gmx:100815362 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0459 11 7923715 7929977 Amo11g0459 11 7923715 7929977 ECH