Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0457 AAGAACGTGATACTTGCGGGGATATTGGAAACAAAACCTTACAGGACCGAACCCAGTTTGAGTTACTACTTCGTATGCTTATCGACATCAAAGTCCACACCTCCTTCTGCTCTCAAATTGTGCTTTTTTGTTCATAACTACAACCGCCTAAGCTCTGCTCGCATTGAAATCTGGGAGAGAGAGATGAGCACGGTCCCAAAAGAAACGATCGAAGTGATAGCACAGAGCATTGGCATCACGAATCTGTCCCCTGATGTTGCCTTCGCTCTCGCCCCCGATCTCGAGTATCGAATTCGCGAAATCATGCAGGAGTCCATAAAATGCATGCGTCACTCAAAGAGAACTATTCTTACAGCAGATGATGTTGATAGTGCACTTGCATTGAGAAATTTAGAGCCAATATATGGTTTCACCTCTAACGACCCTTTGCGGTTCAAAAGAGCTGCTGGACACAAGGATTTGTTCTACATTGATGACAAAGATGTGGAATTTAAAGATCTGATTGAAGCACCGTTACCAAAAGCTCCGCTTGATACATCAATTACCAGTCATTGGCTGGCTATTGAAGGTGTACAACCTGCAATTCCTGAGAATGCTCCAGTTGAAGCTCCCACAGAAATAAGAAAATCGTCTGAGTATAAGGAAGATGGGATTCCAGTTGACATTAAATTACCTGTTAAACACGTAATAACAAAGGAGCTTCAGCTTTACTTTGACAAAATAACTGAGCTAGTTCTAAATAAGCCTGCTTCTATTCCCTTTAGAAGGGCACTAATTAGTTTGGCAACAGACATGGGACTCCATCCTTTGGTTCCTTATTTCTCACGCTTTGTAGCTGATGAGGTGGCACAAAACTTGCATAATTTAACACTTTTATTTGCCTTGATGCGTCTTGTCCGGAGCATTCTACAAAATCCTCACATACATATAGAGCTTTATTTACATCAATTGATGCCACCTATCATTACCTGTGTTGTTGCAAAAAGGATTGGAAACAGACTATCTGATAATCACTGGGAGCTTAGGAACTTCAGTGTTAATCTTGTTGCTTCAATATGCAAAAGATTTGGGAATGTTTATCATAATCTTCAGCCACGAGTGACAAAGACTTTTCTTCATGCATTTTTGGACCCAACTAAAGCTCTACCTCAGCACTATGGTGCAATTAAAGGAATAGCAGCTCTTGGATCAAGACTGGTTCGCTTGTTTATACTTCCAAACCTTGAGCCATATTTGCTTCTCCTCGAGCCGGAAATGCAACCAGAGAAACAGAGAAATGAAACAAAGAGGCAGGAAGCATGGCAAGTATATGGGGCCTTGTTGTGTGCTGTTGGACAATGTATGCATGAAAGGGCCAAAATCTTCAGCAATTTGCTCTCTCCTCCAACACGTGCTTCTTCTAGACCCAATGGAAAAGCCATGATTGCTATGTCAAGCAAACGTAAAGCCAGCACAGAAAACCTAATGCAGCAGCAGCAACCTCCATTGAAGAAACTTGCCACGGATGCCCCCGGGGGTGTGGTACCAATGAACTCCATGTCTGTTGACATGCAAATGCAAGGGTCAGCAGGTGCATTTTCGACCATGATGGGGGTTCCAAATGTTGGCGCGTCATCGATGGCTCGGCAGATATCTAATGACAACACAATGGGGAGAGAGGTTGGCGGTCAACAATCGAAGGTATCTTCCATTCTCGCTCAAGCCTGGAAGGATGACATCGATGCAGGACAATTACTGTCATCGGTGTATGAATTATTTGGTGAAAGTTTGTTATCCTTTATTCCAAAAGCTGAAGCAGGTGTATTTTTGTAA 1812 0.4277 KNVILAGILETKPYRTEPSLSYYFVCLSTSKSTPPSALKLCFFVHNYNRLSSARIEIWEREMSTVPKETIEVIAQSIGITNLSPDVAFALAPDLEYRIREIMQESIKCMRHSKRTILTADDVDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYIDDKDVEFKDLIEAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEAPTEIRKSSEYKEDGIPVDIKLPVKHVITKELQLYFDKITELVLNKPASIPFRRALISLATDMGLHPLVPYFSRFVADEVAQNLHNLTLLFALMRLVRSILQNPHIHIELYLHQLMPPIITCVVAKRIGNRLSDNHWELRNFSVNLVASICKRFGNVYHNLQPRVTKTFLHAFLDPTKALPQHYGAIKGIAALGSRLVRLFILPNLEPYLLLLEPEMQPEKQRNETKRQEAWQVYGALLCAVGQCMHERAKIFSNLLSPPTRASSRPNGKAMIAMSSKRKASTENLMQQQQPPLKKLATDAPGGVVPMNSMSVDMQMQGSAGAFSTMMGVPNVGASSMARQISNDNTMGREVGGQQSKVSSILAQAWKDDIDAGQLLSSVYELFGESLLSFIPKAEAGVFL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0457 603 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 62 603 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Amo11g0457 603 Gene3D - 226 431 IPR046344 GO:0006367
Amo11g0457 603 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 62 603 - -
Amo11g0457 603 Pfam TATA box binding protein associated factor (TAF) 62 126 IPR004823 -
Amo11g0457 603 Gene3D Histone, subunit A 61 127 IPR009072 GO:0046982
Amo11g0457 603 CDD TAF6C 227 443 IPR011442 GO:0006367
Amo11g0457 603 SUPERFAMILY Histone-fold 62 126 IPR009072 GO:0046982
Amo11g0457 603 SUPERFAMILY ARM repeat 256 448 IPR016024 -
Amo11g0457 603 Pfam TAF6 C-terminal HEAT repeat domain 321 408 IPR011442 GO:0006367
Amo11g0457 603 SMART TAF_cls 63 129 IPR004823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0457 Amo-Chr11 7906634 7917478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0457 K03131 - gmx:100799998 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0457 11 7906634 7917478 Amo11g0457 11 7906634 7917478 ECH