Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0360 ATGGCTCCAAGGAAGAAAAATTCTAGCCCTCTTATTCAGAACCGCGTATCCGAGGTTTTCGCGGTCGATATTCACCCTGGCGCGAACATCGGCCGCGGAATCCTTCTGGATCACGCGACTGGCCTCGTGGTAGGCGAGACCGCCGTTATTGGGAACAATGTGTCCATTTTGCACAACGTCACGTTAGGTGGGACCGGAAAAGCTTCCGGCGACCGGCATCCGAAGATCGGTGACGGGGTTTTGATAGGTGCAGGGACTTGTATCTTAGGGAATATTAAGATTGGTGATGGTGCTAAGATTGGTGCTGGTTCAGTGGTGTTGAAGGATGTTCCTCCAAGAACAACTGCAGTTGGGAACCCTGCTAGATTGATTGGAGGAAAAGATAATCCCATTAGGCTTGATAAGATTCCTAGCTTCACTATGGACCATACTTCATATATTTCTGAGTGGTCTGATTATGTTATTTAG 468 0.4829 MAPRKKNSSPLIQNRVSEVFAVDIHPGANIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKDNPIRLDKIPSFTMDHTSYISEWSDYVI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0360 155 PANTHER SERINE ACETYLTRANSFERASE 11 155 - -
Amo11g0360 155 PANTHER SERINE ACETYLTRANSFERASE 11 155 - -
Amo11g0360 155 SUPERFAMILY Trimeric LpxA-like enzymes 11 124 IPR011004 -
Amo11g0360 155 CDD LbH_SAT 20 120 IPR045304 -
Amo11g0360 155 Pfam Bacterial transferase hexapeptide (six repeats) 73 107 IPR001451 -
Amo11g0360 155 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 82 110 IPR018357 GO:0016740
Amo11g0360 155 Gene3D Hexapeptide repeat proteins 23 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0360 Amo-Chr11 5737812 5738279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0360 12 143 Miscellaneous Gene Families AT2G17640 62.879 2.48e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0360 K00640 - jre:108985161 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0360 11 5737812 5738279 Amo11g0360 11 5737812 5738279 ECH