Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0344 ATGTCTGTCTCAACTATTCCAGCACCAAAATTAGGGGAGAGATTGTGTGAAAATGGATTTGAACATCCCAAAATTCTTCCTGCCATTGATGATGCCCATGGAGGAGTTATTGTTGACTTGAATGAACCTATGGATCCAGAACATTTTGCTACATTGCTTAGGTCTTCACTTCTACATTGGAACCTTAAGGGAAAACATGGTGTTTGGATAAAGTTACCTATCAATCTTGTTAACCTTGTGGAAACTGCAGTGAAGGAGGGGTTCTGGTACCACCATGCTGAGCCAAGCTATCTAATGCTAGTTTATTGGATTCCCCAAACAGGCTGCACAATCCCTATAAATGCTTCCCACCGTGTTGCCGTTGCTGCTATAGTCTTAAATCAAAACAAAGAGGTTCTTGTAGTACAGGAAAAAAGAGGTAGATTCCATGGAATTGGATACTGGAAGTTACCTACTGGAGTTGTCGACGCGGGTGAGGAGGTTTTTGCAGCAGCTATTAGAGAAGTAAAAGAAGAGACAGGAGTTGATACAGAATTTGTAGAAATACTAGCATTCAGGGAAGTGCAGAATTCATTCTTTGGGAAATCAGATTTGTCATTTCTTTGCATGTTGCGCCCTCTTTCTGTTGAGATCAAAAAGCAAGAATTGGAAATTGAAGCAGCTCAGTGGATGCCGTTCGAGGAATTCGCAGTTCAACCACTTACTCAGAAACATGAACCCTTCAAGTACGTAGTTGAATTATGTTTGGCAAATGTGGAAGAAAAGTTCTATACTGGATTCTCCCCAAGGCGAGTCTCATCATATTTTGAGGATCAATTGAACTATTTATATATGAATATCAATGAATTGGACAAGTCTTCTTAA 864 0.4005 MSVSTIPAPKLGERLCENGFEHPKILPAIDDAHGGVIVDLNEPMDPEHFATLLRSSLLHWNLKGKHGVWIKLPINLVNLVETAVKEGFWYHHAEPSYLMLVYWIPQTGCTIPINASHRVAVAAIVLNQNKEVLVVQEKRGRFHGIGYWKLPTGVVDAGEEVFAAAIREVKEETGVDTEFVEILAFREVQNSFFGKSDLSFLCMLRPLSVEIKKQELEIEAAQWMPFEEFAVQPLTQKHEPFKYVVELCLANVEEKFYTGFSPRRVSSYFEDQLNYLYMNINELDKSS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0344 287 ProSiteProfiles Nudix hydrolase domain profile. 116 248 IPR000086 -
Amo11g0344 287 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 258 - -
Amo11g0344 287 PANTHER NUDIX HYDROLASE 2 18 286 - -
Amo11g0344 287 Pfam Nudix hydrolase domain 27 104 IPR040618 -
Amo11g0344 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 202 226 IPR003293 -
Amo11g0344 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 114 132 IPR003293 -
Amo11g0344 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 76 94 IPR003293 -
Amo11g0344 287 SUPERFAMILY Nudix 84 245 IPR015797 -
Amo11g0344 287 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
Amo11g0344 287 Gene3D - 24 108 - -
Amo11g0344 287 PRINTS NUDIX hydrolase family signature 162 177 IPR020476 -
Amo11g0344 287 PRINTS NUDIX hydrolase family signature 148 162 IPR020476 -
Amo11g0344 287 PANTHER NUDIX HYDROLASE RELATED 18 286 IPR003293 -
Amo11g0344 287 Pfam NUDIX domain 117 241 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0344 Amo-Chr11 5419124 5424401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0344 - - gmx:100783941 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0344 11 5419124 5424401 Amo11g0344 11 5419124 5424401 ECH