Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0332 ATGGGCAAGAATGAAGAGTCTCATCCATTGTTCGAAACAAGGAGAGCCAAAGGAATATTCATTCATAGAATATTCTCCTTCTCCATGTTTTTGGGAATTTTGTTCATCTGGGTTTACAGAGTGAGTTACATGCCAAGAAAAAGTAGTGAAGATGGGAAATGGGTTTGGGTTGGAATGTTTTTATGTGAGCTATGGTTTGGTCTTTATTGGCTCATGAGGCTTTCACTCAGATGGAACCCTGTTTTCCGACAACCCTTCAGCCACACACTTTCCCAAAGATATGATGATGATAAGCTGCCAGGAGTGGACATATTTGTGTGTACAGCAGATCCAAAAATAGAACCACCAATGATGGTGATTAATACAGTTCTCTCTGTTATGGCATATGACTATCCAACTCATAAGCTTAGTGTCTATCTCTCCGATGATGGAGGTTCGGATATTACGTTCTATGCTCTTTTAGAGGCATCTAATTTTGCCAAGCATTGGTTGCCATTTTGCAAGAAGTTCAATGTTGAACCAAGGTCACCGGCTGCATATTTCAAGAGTATTTCCTCAACTGCTTACTCAGATGATTCTATAAATTCCAAAGAGTTGGTCATCATCAAGAAATTGTATGAAGATATGGAAAGTAGAATAGAAAATGCAGGCAAGTCGGGTGAAGTACCTGAGGAAATTCGCTCCAAAAACAAGAGATTTTCTCAGTGGGATTCATTTTCTTCTCGAAGGGATCATGATGCAATTATTCAAATTTTACTTCATGGGAAAGACTCGAGCGCCAAGGATATAGATGGAATCGTTTTGCCAACCTTGGTATATTTATCTCGCGAGAAGAGGCCCCATGTTGCACATAACTTCAAAGCTGGAGCCATGAATTCACTGATAAGGGTGTCATCAATTATTAGCAATGGGAAAATTATTCTTAATGTAGATTGCGACATGTACGCAAACAATGCACAATCTCTAAAGGAAGCACTTTGCTTTCTCATTGATGAAGAAAAAGGCCATGAAATCGCTTTTGTACAAACGCCACAGGGCTTTGAGAATCTTACAAAAAATGATATCTATGGCGGTGCTCTTAGAGTTATTTATGAGTGGGAATTCCCTGGGATGGATGGTTTTGGTGGACCTATGTACATTGGATCTGGTTGCTTTCATAAGAGGGATACACTATGTGGAAGAAAGTTTAATGATCAAGAAAGCTTGAAGCATTGGAATGGTGAAGATATAAACAATGACCAATCAATAACAAAAACAAGCTTGCATCTATTGGAAGAAAAGTCAAAGGCTCTTTTAAGTTGCACTTATGAGAATAACACACTATGGGGAAAAGAGATGGGACTACTATATGGTTGTGCAGTGGAGGATGTTATAACTGGTTTAGCTATACAATGTAGAGGGTGGAAATCAGTGTACTATAATCCAAAAAGGAAAGCTTTCTTAGGAGTATCTCCAACCACATTGCCAGAAGCATTAGTTCAACATAAGAGATGGTCTGAAGGAGGATTCCAAATTCTGCTCTCTAAGTATAGTGCTGCATGGTGTGCTTATGGATTAATCAGCCCAGGACTTCAAATCACATATTGTTTTTACAATCTTTGGGTCCTTAATTGCTTGCCAACTCTTTATTACTCAATTTTCCCTTCACTTTGTCTCCTCAAAGGGATTTCCTTGTTTCCACAGATGTCAAGTCCATGGTTCATACCATATGCATATGTCACACTTGGTGAAAATACTCAATGCTTGTTGGAATTTTTGTGGTCAGAAGGCACAATAAAAGGTTATTGGAATGACCTAAGGATGTGGCTTTACAAGAGAACAAGCTCATACTTATTTGCCTTGATTGACACCATCTTCAAGTCTCTAGGGTTTTCAAGTTTAGACTTTGTGATCTCAGCTAAGGTAGCTGAAGAAAATGTTTCTCAAAGATATAAGAAGGAGATAATGGAGTTTGGAAACTCTTCCCCAATGCTCACTCTTCTTGCAACACTAGCATTGTTCAATTTGTTTTGTCTTGTTGGTGCCTTATTCAAAGGTGGTCTTGGAATGTTGATGGTGTTGCCATTGCAAGTTCTACTAAGTGTGGTGTTGGTTCTCATCAATTTGCCTTTGTATGAAGGCCTCTTTCTAAGGAAGGACAAGGGAAGATTTCCAACCTCTGTTGTGTTTAAATCAATGGCAGTGGCTCTAAGTGCTTGTGTTCTATCAAATGTGAATGTCTTCACTATAATTTAG 2235 0.3884 MGKNEESHPLFETRRAKGIFIHRIFSFSMFLGILFIWVYRVSYMPRKSSEDGKWVWVGMFLCELWFGLYWLMRLSLRWNPVFRQPFSHTLSQRYDDDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTHKLSVYLSDDGGSDITFYALLEASNFAKHWLPFCKKFNVEPRSPAAYFKSISSTAYSDDSINSKELVIIKKLYEDMESRIENAGKSGEVPEEIRSKNKRFSQWDSFSSRRDHDAIIQILLHGKDSSAKDIDGIVLPTLVYLSREKRPHVAHNFKAGAMNSLIRVSSIISNGKIILNVDCDMYANNAQSLKEALCFLIDEEKGHEIAFVQTPQGFENLTKNDIYGGALRVIYEWEFPGMDGFGGPMYIGSGCFHKRDTLCGRKFNDQESLKHWNGEDINNDQSITKTSLHLLEEKSKALLSCTYENNTLWGKEMGLLYGCAVEDVITGLAIQCRGWKSVYYNPKRKAFLGVSPTTLPEALVQHKRWSEGGFQILLSKYSAAWCAYGLISPGLQITYCFYNLWVLNCLPTLYYSIFPSLCLLKGISLFPQMSSPWFIPYAYVTLGENTQCLLEFLWSEGTIKGYWNDLRMWLYKRTSSYLFALIDTIFKSLGFSSLDFVISAKVAEENVSQRYKKEIMEFGNSSPMLTLLATLALFNLFCLVGALFKGGLGMLMVLPLQVLLSVVLVLINLPLYEGLFLRKDKGRFPTSVVFKSMAVALSACVLSNVNVFTII* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0332 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 268 479 IPR029044 -
Amo11g0332 744 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 6 737 - -
Amo11g0332 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 184 IPR029044 -
Amo11g0332 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 737 - -
Amo11g0332 744 Pfam Cellulose synthase 423 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
Amo11g0332 744 Pfam Cellulose synthase 102 401 IPR005150 GO:0016020|GO:0016760|GO:0030244
Amo11g0332 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 117 555 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0332 Amo-Chr11 5192652 5206230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0332 6 733 Glycosyltransferase AT1G55850 55.798 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0332 - - aip:107645456 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0332 11 5192652 5206230 Amo11g0332 11 5192652 5206230 ECH