Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0329 ATGGTAGCTAAAATCCGGCAAAGTGCTACCGACTCACCCAACCCAACAAAGCCAGAGGTTGGAGAGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCTGTCTCTTTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTTTCATTAAGAAGGCAAAACCCTATTCTGCTGAGAGTGTTTTGGCAAAGGAGACACAACTTCATATAGCCCAGAAAGAGTTGAACAAACTAAAAGAACAAGTAAATAATGCTGAAACTACTAAGGCTCAAGCTCTTGTTGAGCTTGAAAGGGCTAAAAGGACAGTCGTGGAACTGACGCAAAAGCTAAAAGTTGTTGATGAATCCAGGGAACTAGCGATCACAGCAACAGACACTGCAAAGGATCATGCGAAACAGCTTAAAGAAGTAAAGTATGGCAACTCTGATGGAACAAATGGTGCTTGGAAAGAAGAGCTTGAAGCTGCAGTTAAGAGGCATGCATCCATCATTACGGAACTCAATGCTGCAAAGCTAGAACTCAGCAAGATTCGTCAAGAATATGATTCTTCCTCGGATGCAAGAGAGTCTGCTTTCAAGCAAGTGGCAGAAGCAGAAAATGCGATGAAGGAAAACTCAGAAAGAGCATCTGAGCTGTCTAAAGAAATTATTGCTGTAAAGGAATCAATTGAACAAACCAAGCATGCATCTGTTGAAGCACATCAGCAGCAAGCAATGGTGCTAGCTGAGAAAGATGTTCTAAGACGATCATATAAAGCCACCCTTGAACAATCCGAAAAGAAAATGCTTGATTTAAAGAAGGAGTTCAATCCTGAGCTTGCCAAAAATCTTGAAACACAGCTGGCTGAGACATTGAGTGAAATTGGTGCTCTGCAAAAGGAAATGGAAAATAAAAGGACGTCGGATTTGGACTCCGTGAAAAGTGTCACTCTGGAACTTGATGATGCCAAGGAGTCACTGCATAAGGTAGCAGATGAGGAAAGCTCTCTTAGGAGCTTGGTGGAAGCTCTTAAGGTGGAACTTGAGAATGTAAAGAAGGAACATTTGGAATTGAAGGAGAAAGAGTCTGAAACTGAATCTGTTGTCGGTAATCTGCATGTCAAGCTTCGTAAAAGTAAGTCTGAGCTTGAAGCCTGCTTGGCAGAAGAATCTAAAGTTACAGGTGCATCTGAGGAAATGATCTCAACGCTGAACCAGCTGCAATCTGAAGCTGAAAATGCACGGCGGGAAGCAGAAGACATGAAGAACAAAGCCACAGAATTGATGAAGGAGGCTGAAGTTACCAAGCTTGCATTAGAAGATGCAGAGGAAAAGCTCAAAGTTGCACTGGAAGATGCAGAAGCAGCAAAAGCAGCAGAGGCTAGTGCCCTTGACCAGATTACGGTGTTAACTGAAAGGACAAGTGCTGCGCGCGCCTCAACATCCGAATCTGGTGCTAAAATTACAATCTCAAGAGAGGAATTCGAGTCGCTAAGTCGTAAAGTTGAGGAGTCTGATAAATTAGCAGACATGAAAGTAGCTGCTGCCAAGGCACAGGTTGAGGCTGTGAAGGCAAGTGAAAATGAAGCTATCAAAAGATTAGAGACAGCTCAAAAGGAGATCGAGGATATGAAGACGGCAACACAGGAGGCCTTGAAAAAGGCCGAGATGGCTGAAGCGGCAAAGAAGGCAGTGGAGAGCGAGCTTCGGAGGTGGCGTGAGCGGGAGCAGAAGAAGGCAGCAGAAGCCGCTTCTCGAATATTGGCCGAAACTCAGGTGTCATCAGAATCATCTCCTCAGCACTACAGGATTCAAAAGCAGAACCCTCCTCCTCACAAAATGGAGGCAAATAAGCTCGAGAAAGAGAAGGTCTCAGTTTCAAAGAAAGTCCTTGTGCCTACCATTAGCGGTATCTTCCACAGGAAGAAAAACCAGGTTGAAGGTGGATCTCCGTCTTTTTTGCCTGGTGAGAATCTTGCATGA 1965 0.4427 MVAKIRQSATDSPNPTKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPFIKKAKPYSAESVLAKETQLHIAQKELNKLKEQVNNAETTKAQALVELERAKRTVVELTQKLKVVDESRELAITATDTAKDHAKQLKEVKYGNSDGTNGAWKEELEAAVKRHASIITELNAAKLELSKIRQEYDSSSDARESAFKQVAEAENAMKENSERASELSKEIIAVKESIEQTKHASVEAHQQQAMVLAEKDVLRRSYKATLEQSEKKMLDLKKEFNPELAKNLETQLAETLSEIGALQKEMENKRTSDLDSVKSVTLELDDAKESLHKVADEESSLRSLVEALKVELENVKKEHLELKEKESETESVVGNLHVKLRKSKSELEACLAEESKVTGASEEMISTLNQLQSEAENARREAEDMKNKATELMKEAEVTKLALEDAEEKLKVALEDAEAAKAAEASALDQITVLTERTSAARASTSESGAKITISREEFESLSRKVEESDKLADMKVAAAKAQVEAVKASENEAIKRLETAQKEIEDMKTATQEALKKAEMAEAAKKAVESELRRWREREQKKAAEAASRILAETQVSSESSPQHYRIQKQNPPPHKMEANKLEKEKVSVSKKVLVPTISGIFHRKKNQVEGGSPSFLPGENLA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0329 654 Coils Coil 391 453 - -
Amo11g0329 654 Coils Coil 62 117 - -
Amo11g0329 654 Coils Coil 151 216 - -
Amo11g0329 654 Coils Coil 275 295 - -
Amo11g0329 654 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 627 - -
Amo11g0329 654 Coils Coil 307 362 - -
Amo11g0329 654 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 627 - -
Amo11g0329 654 MobiDBLite consensus disorder prediction 582 599 - -
Amo11g0329 654 MobiDBLite consensus disorder prediction 633 654 - -
Amo11g0329 654 MobiDBLite consensus disorder prediction 569 617 - -
Amo11g0329 654 Coils Coil 511 576 - -
Amo11g0329 654 Coils Coil 249 269 - -
Amo11g0329 654 MobiDBLite consensus disorder prediction 1 29 - -
Amo11g0329 654 Pfam Weak chloroplast movement under blue light 22 572 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0329 Amo-Chr11 5047018 5052214 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0329 - - gmx:100794569 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0329 11 5047018 5052214 Amo11g0329 11 5047018 5052214 ECH