Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0317 ATGGGGAAGAGGAAAGAGCGTCGCCTTGCCGCTCTCAGCAACGCTGGTCGCAGAGTCAAACTTGACCTCTTTGCGGAACCCTCTGGAGAGTTGGGTGGCTCCAATGTACAAGGTGATGCTGGAGGGGATACTGATTCACAACATCGTGATGGGTTACCCAATTCACCCTCTTCTTCAGGTCAACCACAGAATCCATTGCTGCTGCTTGGGCAATATAGTGATGATGAAATGGATGATGGATCAAGTAAAGTGCCTGGTGATGCTAAGGTGCAGAGTCCAGTGTCTAATGAGGAGGCTAAGGATTCTATTGAGGAAAGATCCAAAGACAACATCAGTGTCTCTGTTGATCATGTATCTCAGAATGATGGACAGCAGATTAGAATGGAAAATTCTAGTTCAATTGATCCTGAAGGCAGCAAAGAAAATGCAAGTAATGGTGCTGCTGGTAATTTTCCAAGGGAAATGGTTTCCAATGACCAAATGTCCGCTTCAAGAAGCTTTGATGAACAACTTGGTACTGATATTAATTTTGGATGGAAGATGGTGATGCATGAGGAAAGCCAGCGCTATTATTATTGGAATGTTGAAACTGGGGAAACTTCATGGGAAGTGCCCCAGGTTTTGGCGCAAGCAGCTCAGTTATCGAGCGATTCAATGCTTCCTTCTGTTGATGATAAAACAGTCGGCGGTGCTGTTGGTATTGATAATTCCAGTTTTCCCTCTTCTGTGATGCAGGACACTTCAGCTACTTTCACACTTGATAATTCAGCAGAAACCATAGTGACTTCTCATAATGAGTTGTATGGGCATGGATCCCAAATGAATGGATGTAGTGGTGAACATACAAATGTAACTCATGGAAGGGAATCGATTGGGAATAATGGTAGTATGAGTTTTCCTTATGGAGGTGATCCTTCATATGTTCCAAATTACAGTGCTGAAGAGCAGCAGTCACAAATTGATTTGCCTTCTCATCTTGAAAAACAGTGTGAGATTTTATTAGGGAGGATGAAGTCACTAAAAGAGTCAAAGGGCAATTTGCAAGATCAGGACACCTTGTCAAAGTATATGTTAGAGATTGAGATTAGACTTTCTGATATTAGGTCGCTTGCTTCATATGGAGCATCTTTGCTTCCATTCTGGGTGCATTCCGACAATCAGATAAAACTACTTGAAAGTGTGATAAACAATTTCCAAACTGCGGAATCAGCAGAAGTTGAAGCTGAGGATAAAGATGTCCCTGACTCGGAAGCAGTGGGTGAGCAGCAGAATGGCTTGGGACATGATTCTGAATTATATAACAATAACAACAAAGACTGCACTCTTACTTCTGAAGTTTCGAATGGACCTCAGGCTGATGCTTCACCTGTAGTTTTGAAAGATACCTATGATGAAATTCCTACAAATTCTCAGCATTTTTCTTCATCTAATGTTTCTGATAATCATTTGGAAACTGGTATAGATGTTCATACAGAAGTTCAAACAAATACAAATCCTGAGCAATCAACTCTTGGACATGGGTATAATTTTGAAGATGATGATGACATGGATGTGGACATGGAAGTTGAAGATATGAATTCCTCAGGCAATGTAACTGATGCAGATGCATCAGTTGCAAAGGATCTTGGACAAACAGAGCATGAGGTTCAGTTGAATCCACTAGGCGACAGCCATTCTTTGTTGCCAGAACATCAGTTTGTTGTCCCCCCACCTCCAGACGATGAGTGGATCCCTCCACCACCGCCTGATAATGAGCAGGCCCCTCCCCCTCCGCTGCCACCCGATGATGAACAGGCGCCCCCTCCTCCACCTGGTGATCCACAACCACCTCCATATCATGCTCTCCCATCTTACGCCGAGACAGGGCAGCCTCTTTCTTACACACAATATAGTTTATCTTATGGACAGACAGGGCAGTCACTTTCTTACACACCTGTTGCTGGCTCCGAGTATTATGGACAGACAGCTCCTGAAGTCCCAACAAGTAATATATATGGACAAATTGCTATGCCACCTGGACAGCTCTACTATAGTGCAGTTCCTAACTTGTATAGTGAAAATCCTCAACTTGTGGTCAATCCATCTGACCCAGTTTCTTATTATGAGCTTCAAGAGGGAGCTGGATCAGCTAACATACCTGTTAACAATTCTAGTGATTCTTGTGTTGGTGGGGTAGACAGGGCATCTGGTGATGTTCCATCCACCTCATCTAGCATGGCGGCACCTGCAACTGTTTCGGTTGATGAGAGTGCCTCATTGCCATCAACTATTGCTGAAGCTGCTGCAGTAAGTGCTGCCTCATCGGCAGTTGCTAAAACCCAAACCAAAGTGCGTAAAAAGCGGGCAGTTGCAGTTGGATCTTCCTTAAAGTCTAATAAAAAGGTTTCAAGTTTGGTGAACAAGTGGAAAGCGGCTAAAGAGGAGTTGCTTGAAGAAGAGGAAGAGCCTGAAAGTGTGTATGAGGTGTTCGAAAGGAAGCGCCAAAGGGAAATAGAGGAGTGGCATGCAAAGCAAATTGCTAGTGGAGAGGCCAAAGATAATGCTAACTTTCAACCTCTTGGTGGTGATTGGCGAGAGCGGGTCAAGCGCAAAAGGGCACAAAAAGCACGTGAATCTCTTGAGGCGCCGCACGACGCAGTTGAGCCCCGCCAACAGCAGCCTGATATGACTGAACTCTCCAAGGGTCTACCATCTAATTGGCAGGCATATTGGGATGAGACCTCAAAGCAGGTTTATTATGGTAACACTATCACCTTGGAAACGACATGGGATCGACCGACAAAATGA 2787 0.4438 MGKRKERRLAALSNAGRRVKLDLFAEPSGELGGSNVQGDAGGDTDSQHRDGLPNSPSSSGQPQNPLLLLGQYSDDEMDDGSSKVPGDAKVQSPVSNEEAKDSIEERSKDNISVSVDHVSQNDGQQIRMENSSSIDPEGSKENASNGAAGNFPREMVSNDQMSASRSFDEQLGTDINFGWKMVMHEESQRYYYWNVETGETSWEVPQVLAQAAQLSSDSMLPSVDDKTVGGAVGIDNSSFPSSVMQDTSATFTLDNSAETIVTSHNELYGHGSQMNGCSGEHTNVTHGRESIGNNGSMSFPYGGDPSYVPNYSAEEQQSQIDLPSHLEKQCEILLGRMKSLKESKGNLQDQDTLSKYMLEIEIRLSDIRSLASYGASLLPFWVHSDNQIKLLESVINNFQTAESAEVEAEDKDVPDSEAVGEQQNGLGHDSELYNNNNKDCTLTSEVSNGPQADASPVVLKDTYDEIPTNSQHFSSSNVSDNHLETGIDVHTEVQTNTNPEQSTLGHGYNFEDDDDMDVDMEVEDMNSSGNVTDADASVAKDLGQTEHEVQLNPLGDSHSLLPEHQFVVPPPPDDEWIPPPPPDNEQAPPPPLPPDDEQAPPPPPGDPQPPPYHALPSYAETGQPLSYTQYSLSYGQTGQSLSYTPVAGSEYYGQTAPEVPTSNIYGQIAMPPGQLYYSAVPNLYSENPQLVVNPSDPVSYYELQEGAGSANIPVNNSSDSCVGGVDRASGDVPSTSSSMAAPATVSVDESASLPSTIAEAAAVSAASSAVAKTQTKVRKKRAVAVGSSLKSNKKVSSLVNKWKAAKEELLEEEEEPESVYEVFERKRQREIEEWHAKQIASGEAKDNANFQPLGGDWRERVKRKRAQKARESLEAPHDAVEPRQQQPDMTELSKGLPSNWQAYWDETSKQVYYGNTITLETTWDRPTK* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0317 928 Gene3D - 174 216 - -
Amo11g0317 928 Gene3D - 889 928 - -
Amo11g0317 928 MobiDBLite consensus disorder prediction 565 614 - -
Amo11g0317 928 MobiDBLite consensus disorder prediction 406 439 - -
Amo11g0317 928 SUPERFAMILY WW domain 892 927 IPR036020 GO:0005515
Amo11g0317 928 MobiDBLite consensus disorder prediction 553 619 - -
Amo11g0317 928 ProSitePatterns WW/rsp5/WWP domain signature. 900 926 IPR001202 GO:0005515
Amo11g0317 928 CDD WW 178 205 IPR001202 GO:0005515
Amo11g0317 928 MobiDBLite consensus disorder prediction 856 878 - -
Amo11g0317 928 Coils Coil 792 815 - -
Amo11g0317 928 MobiDBLite consensus disorder prediction 26 153 - -
Amo11g0317 928 ProSiteProfiles WW/rsp5/WWP domain profile. 894 928 IPR001202 GO:0005515
Amo11g0317 928 SMART ww_5 174 207 IPR001202 GO:0005515
Amo11g0317 928 SMART ww_5 895 928 IPR001202 GO:0005515
Amo11g0317 928 Pfam WW domain 178 205 IPR001202 GO:0005515
Amo11g0317 928 Pfam WW domain 896 926 IPR001202 GO:0005515
Amo11g0317 928 MobiDBLite consensus disorder prediction 98 112 - -
Amo11g0317 928 PANTHER OS06G0298400 PROTEIN 590 928 - -
Amo11g0317 928 PANTHER OS06G0298400 PROTEIN 1 591 - -
Amo11g0317 928 ProSitePatterns WW/rsp5/WWP domain signature. 179 205 IPR001202 GO:0005515
Amo11g0317 928 SUPERFAMILY WW domain 174 207 IPR036020 GO:0005515
Amo11g0317 928 MobiDBLite consensus disorder prediction 113 146 - -
Amo11g0317 928 CDD WW 897 927 IPR001202 GO:0005515
Amo11g0317 928 ProSiteProfiles WW/rsp5/WWP domain profile. 173 207 IPR001202 GO:0005515
Amo11g0317 928 MobiDBLite consensus disorder prediction 840 895 - -
Amo11g0317 928 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0317 Amo-Chr11 4812260 4819031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0317 K24774 - gmx:100791890 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0317 11 4812260 4819031 Amo11g0317 11 4812260 4819031 ECH