Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0312 ATGAGGAAGCCAGAGGAGATCTCAAAGGAGGAATATGCTGCTTTCTACAAGAGTCTGACCAATGACTGGGAAGAGCATTTGGCTGTGAAGCACTTTTCTGTTGAGGGTCAATTGGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAGGGCACCCTTTGATCTCTTTGACACAAGGAAAAAGCCAAACAACATCAAGCTCTATGTTCGCCGAGTCTTCATCATGGACAACTGTGAGGAGTTGATTCCTGAATACCTTGGCTTTGTCAAGGGTATCGTAGACTCAGAAGATCTTCCACTTAACATTTCAAGAGAAATGCTTCAGCAGAACAAGATCCTCAAGGTCATCCGCAAAAACTTGGTCAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAGAACAAGGAGGACTACAACAAGTTCTATGAATCTTTCTCCAAGAACCTGAAGCTGGGTATCCACGAGGATTCTCAGAACAAGGGAAAGATTGCTGAACTTCTCAGGTACCATTCCACCAAGAGTGGTGATGAGATGACTAGCCTCAAGGACTATGTGACCAGGATGAAGGAAGGCCAGAACGATATCTACTACATCACTGGTGAAAGCAAAAAAGCTGTTGAAAACTCCCCATTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTCTTCATGGTTGATGCCATTGATGAGTATGCAGTTGGTCAGCTCAAGGAATTCGAGGGCAAGAAGTTGGTGTCTGCCACCAAGGAGGGGCTCAAACTTGACGAGAGCGAGGATGAGAAGAAAAAGAAGGAAGAGCTGAAGGAGAAATTCGATGGTCTTTGCAAGGTCATCAAGGATGTCTTGGGTGATAAGGTGGAGAAGGTGGTTGTTTCCGACCGTGTTGTTGACTCACCTTGCTGTCTTGTGACCGGTGAATATGGCTGGACTGCTAACATGGAAAGGATCATGAAGGCTCAGGCCTTGAGGGACAACAGCATGGCAGGGTACATGTCAAGCAAGAAGACAATGGAAATTAACCCAGAGAACCCCATCATGGAAGAGCTGAGGAAGCGTGCAGATGCAGACAAGAACGACAAATCTGTCAAGGATCTTGTTCTCTTGCTCTTTGAAACTGCACTCCTCACATCTGGGTTCAGCCTTGATGATCCCAACACATTCGGTAACAGGATCCACAGAATGTTGAAGCTTGGTCTGAGCATTGATGAGGATGCTGGTGATGTAGATGCTGACATGCCTCCATTGGAGGAAGCTGATGTTGATGCTGAAGGAAGCAAGATGGAAGAAGTTGACTAA 1296 0.4568 MRKPEEISKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYESFSKNLKLGIHEDSQNKGKIAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKEELKEKFDGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGDVDADMPPLEEADVDAEGSKMEEVD* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0312 431 Coils Coil 254 274 - -
Amo11g0312 431 Gene3D - 163 249 - -
Amo11g0312 431 Gene3D - 1 162 - -
Amo11g0312 431 SUPERFAMILY Ribosomal protein S5 domain 2-like 1 250 IPR020568 -
Amo11g0312 431 Pfam Hsp90 protein 1 412 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo11g0312 431 PANTHER HEAT SHOCK PROTEIN 81-2 1 429 - -
Amo11g0312 431 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 429 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo11g0312 431 SUPERFAMILY HSP90 C-terminal domain 274 395 IPR037196 -
Amo11g0312 431 MobiDBLite consensus disorder prediction 406 431 - -
Amo11g0312 431 Gene3D - 250 399 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0312 Amo-Chr11 4769872 4773394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0312 K04079 - sind:105176572 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0312 11 4769872 4773394 Amo11g0312 11 4769872 4773394 ECH