Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0311 ATGGCACTTTTAACATTTCTCATGCTTTCACCTCCAAGGTGCATGGAGAATGCAAATCTCAAATGCGCTGTACCTAAAGGCTTAGAAAATAATAGTCTCAGAGCAATAACAGAGAGAAGATTTTCCAGAAGGCTAGTTCTGCATTTTCTGGGTATTAACCATGTGATTTATAAAGCTTCTCTTGCTTTTGCTGCGCCAATTATGCCAGAAATGAAGGAACCTGAAGTTATAAGGACTTTGAAGCTGCCTAGTGGAGTCATAATTCAAGATATAGTTGAAGGAGGAGGACCAGAGGCACATGATGGAGACTTGGTTGAATTCAATTATGTATGCAGGCGTTCAAATGGCTACTTCGTCTACAGTACGGTGGACCAATTTAGTGGAGAAAGTAAACCTGTCACACTTCCTTTGGATGAGAACCAGATGATTGTGGGTTTAAAGGAGGTTCTTATTGGCATGAGATCTAATGGGAAGAGAAGGGCACTAATACCACCTTCCATGGGATATGTGAATGAGAACTTGAAACCAATACCAGAAGAGTTTGGCCCTCGACGCAGCCTTTTCTCTCATGCACAAGAGCCCTTGGTATTTGAAGTTCAGCTCTTGAAAATTTTGAGTCCACCATCATCAACATCTGCATATTCAACTAAATGA 654 0.4113 MALLTFLMLSPPRCMENANLKCAVPKGLENNSLRAITERRFSRRLVLHFLGINHVIYKASLAFAAPIMPEMKEPEVIRTLKLPSGVIIQDIVEGGGPEAHDGDLVEFNYVCRRSNGYFVYSTVDQFSGESKPVTLPLDENQMIVGLKEVLIGMRSNGKRRALIPPSMGYVNENLKPIPEEFGPRRSLFSHAQEPLVFEVQLLKILSPPSSTSAYSTK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0311 217 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 34 204 - -
Amo11g0311 217 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTIC 34 204 - -
Amo11g0311 217 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 97 202 IPR001179 GO:0003755
Amo11g0311 217 Gene3D - 64 215 IPR046357 GO:0003755
Amo11g0311 217 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 205 IPR001179 GO:0003755
Amo11g0311 217 SUPERFAMILY FKBP-like 66 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0311 Amo-Chr11 4761226 4764407 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0311 - - vun:114187599 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0311 11 4761226 4764407 Amo11g0311 11 4761226 4764407 ECH