Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0280 ATGGATGTGATGAACTCTCTCCAAATAAGAAGTGGCACAGGTGCTTATGATGATGATGGACATGTCAAAAGAAAAGGAACCGTAAGGAGTGCCGTGGCTCATATCATCACGGCGGTGATCGGCTCCGGCGTTCTGTCTCTTGCTTGGAGCACTTCACAGCTAGGATGGATTGCAGGGCCAATTACCTTGCTCTGTCTTGCAATTATAACCTATGTTTCTTCATGTCTCTTATCTGATTGTTACAGAACTCCGGATCCTATAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGCCAATCTTGGTAATAAAAGTACTTGGTTTGCTGGTTTCCTTCAATTTTTGGCCTTATATGGGACTTGTATAGCATATGTCATAACCACAGCGACCAGTCTAAGTTTGTATATGGTGATGTTTGGGTTGGTCCAGATTGTGATGTCGTTCATACCAGATCTTCATAACATGGCATGGGTTTCAGTTGTTGCTGCAATTATGTCCTTCACTTATTCATTCATAGGACTTGGACTTGGCATCGCCACAGTTATAAAAAATGGAAGAATTATGGGTAGCATAACAGGGGTAGCAACTAATAACGTTGCAGACAAAATATGGTTAGTGTTTCAAGCACTTGGCGACATCGCATTCTCTTATCCCTACTCTCTTCTCCTCCTTGAGATTCAGGACACACTGAAGTCTTCTCCACCGGAAAACCAAACCATGAAGAAGGCGTCGATGATTGCAATCTTGATCACAACATTCTTCTATCTCTGTTGCGGATGCTTTGGATACGCCGCCTTCGGAAACTCTACGCCGGGAAACCTGCTCACTGGGTTTGGCTTCTATGAGCCTTTCTGGCTTGTTGACATTGCTAATAATTACAAATCAGATTTTTTTGAACTTACATGTGTATATAACTTTCATTCTCGTCAAATTGAATTTGAGAAGTATTCACATATTTATTGTCAGCCAATATATAATGTAGCTGATAGATGGAGATCAAGAAAGTTCCCCAACAATGGTTTTGTGAACAATTTCTACAAAGTGAAACTACCCCTTTTGCCCCCTTTTAACTTCAATCTTTTCAGGTTCTGTTTCAGAACAATTTTTGTGATTTCAACCACAGGAGTTGCAATTCTTTTCCCTTACTTCAACCAAGTTCTTGGAGTTTTAGGAGCCATAAACTTTTGGCCATTGGCAATTCTTTTTCCAGTGGAGATGTACTTAGTTCAGAAAAAGATTGAAGTATGGAGTAGCAAATGGATTGTTCTTAGGATATTTAGCTTTGGTTGCTTTCTTGTGACCTTAATGGGGTTTGTGGGCTCACTTGAAGGAATCATAAGACAGAAAATTCATTGA 1362 0.4023 MDVMNSLQIRSGTGAYDDDGHVKRKGTVRSAVAHIITAVIGSGVLSLAWSTSQLGWIAGPITLLCLAIITYVSSCLLSDCYRTPDPITGKRNYSYMDAVRANLGNKSTWFAGFLQFLALYGTCIAYVITTATSLSLYMVMFGLVQIVMSFIPDLHNMAWVSVVAAIMSFTYSFIGLGLGIATVIKNGRIMGSITGVATNNVADKIWLVFQALGDIAFSYPYSLLLLEIQDTLKSSPPENQTMKKASMIAILITTFFYLCCGCFGYAAFGNSTPGNLLTGFGFYEPFWLVDIANNYKSDFFELTCVYNFHSRQIEFEKYSHIYCQPIYNVADRWRSRKFPNNGFVNNFYKVKLPLLPPFNFNLFRFCFRTIFVISTTGVAILFPYFNQVLGVLGAINFWPLAILFPVEMYLVQKKIEVWSSKWIVLRIFSFGCFLVTLMGFVGSLEGIIRQKIH* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0280 453 PANTHER OS05G0424000 PROTEIN-RELATED 9 134 - -
Amo11g0280 453 PANTHER OS05G0424000 PROTEIN-RELATED 136 452 - -
Amo11g0280 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 136 452 - -
Amo11g0280 453 Pfam Transmembrane amino acid transporter protein 320 448 IPR013057 -
Amo11g0280 453 Pfam Transmembrane amino acid transporter protein 25 293 IPR013057 -
Amo11g0280 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0280 Amo-Chr11 4137335 4144084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0280 12 435 Organic Solute Cotransporters AT1G77380 49.554 3.29e-160 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0280 K24917 - gmx:100818535 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0280 11 4137335 4144084 Amo11g0280 11 4137335 4144084 ECH