Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0021 ATGAGTTCCCAGACTCATACTCGAACCTCTAAACCCACAACAAAACCCTCTCAACAACAACACTCTTCATCAAAAACACCACAATCACACTCACACTCTTCTTCAACGCCTTCAACAACAACAACAAATGCTTCGTCTCTATCTACCCACCTTGCTATGGTGGAACTCAAGCAGAGGATCCTAACTTCCATTTCCAAGCTCTCGGACCGAGACACACACCAGATCGCAATCGAAGACCTCGAAAAGACCATTTTGACCCTCTCCCCTGAATCAATTCCAATGATACTCAACTCCCTATACGACGCCGCATCAGCTGACCCTAAACCCGCCGTCAAGAAAGAYTCTCTCCGCCTCCTYACCTTYGTTTGCGCTTCCCATCCCGACGCCGCCGTCCCTCACCTTACGAAGATCCTCGCTGCCGTCGTTCGCCGCCTCAAGGAYGCTGATTCCGGCATCCGTGAGGCGTGCCGTGAGGCAGTTGGAGCACTTGCCGCTCAGTATTTGAGAGGAGGAAGCAATGGCAATGGTAATGGTGGTGGTGATAATGGTGCTGGAGYTGGTTCGGTTGTGGCGTTGTTTGTGAGGCCGTTGTTTGAGGCGATGGGAGAGCAGAACAAGGGAGTTCAGGCTGGTGCCGCGGCTTGTTTGGCGAAGATGGTGGAATCCGCCGGCGGCGATGGTGGTGGTGGTGGGGCGCTGGTGCCGGCGTTCCAGAAGATTTGTCCAAGGATCTGTAAGCTGCTTGGAAGCCCTAATTTCTTGGCGAAGGCTGCAATCTTGCCTGTTGTTTCCAGCTTGTCACAGGTTGGAGCAATTACACCACAAAGCTTGGAACACTTGCTTCCTAGCATTCATGACTGCCTTACCAGTACTGATTGGGCAACACGTAAAGCAGCGGCTGACGCRTTAAGTTCCTTGGCTCTGCACTCTAGGGGTTTGGTTGCCGATGGAGCAGCATCTACGGTAGCAGTACTGGAGGATTGCCGGTTTGACAAGATAAAACCTGTGAGAGACAGCATGACGGAGGCATTGCAATTGTGGAAAAATATTGCAGGGAAAGGAGATGGATCCCCTGATGATTCAAAGCCTGTATCTGGTGATGGTGACAAATCTAGTGCATCTCCTTTACCAGAAACAAGTGCAAAATTAAATCTTGGGGACAGGAAGATTGATCCTTCAGCAAAGGAGTCGCCCGCAGGTACTTCAGATGTGGATTCCACTGGCAAAGCAAAAGCAGCTGGCATCTCAGAGAAAGCRGTTGTAATATTAAAAAAGAAAGCACCTGCCTTAAGTGATAAAGAATTAAACCCAGAATTTTTCCAGAAACTTGAAAGAAGGGGTTCGGATGATTTGCCAGTGGAAGTAGTTCTTCCTCGGAGAGGTCTCAATTCTTCAAGCTCAAACAATGAGGAGGAATCTGGGGCTAATGCTAAAGATTCAAAAGAGAGAAACATCCCCAATCACATGTTAGACAGAGGCAATGATAGAAATTCCAAACAACATAGTTTTGATGATTTTGCACCTGATAAGAGGATGAATGCAAAAGAACTGAGGGCAAAAGCATTTGATACTGATGATAGAACTGAAATTGATCAAAGGGAGGGTTCTTCAAATCTTGCCGGTCAATCAGAAGTATCCTTCTCYAATAACAGGGGAAACTGGTTGGCCATCCAGAGGCAGCTACTGCAGCTAGAAAGGCAACAGGTTCATTTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATGGCATGGTGACACTAGAGAACAGAGTTCGAGGTCTAGAAAGAATTGTTGAAGACATGTCACGTGATTTATCGATATCATCTGGTCGTAGAGGTAGTAACTTCACAGGGTTTGAGGGGTCCAGTAGGCCTTCTAGCAAGTATAATGGTTTTAATGACTATTCCACTGCTAAATATGGAAGAGGTGGTGATGGACGTACTCCATTTAGCGAAAGATTTTCTCAAGCAGATGGAAATGCATTAGGTATGAGGGGAAGAGGGCCATCTTGGAGATCTGACACGTCTGAGGGATGGGATTTTCCTGKGTATGGTGCTTCCAGAAATGGGCAGATTTCCACACGGAGGGCTTTTGGTGGTAGTTCTGTTGATGCGAGATCACCAAAATCAGTTCCTGAAGGTGATCAAGGGGGCAGCAGGAGAGCTTGGGATAAAGCAGCACTGCCCATTCGGCTTGGAGAGGGGCCTTCTGCAAGAAGTGTCTGGCAAGCTTCCAAGGATGAAGCTACCTTGGAAGCGATTCGRGTTGCTGGGGAGGACAATGGAACAGCTCGAGCAACAAGAGTTGCAATCCCCGAAATGACTGCAGAAGCTATGGCTGATGACAATGTTGGACAAGATAGGGATGCCATCTGGACTTCTTGGAGCAATGCAATGCATGCCCTTCAAGTGGGTGATATTGATTCGGCCTTCGCAGAAGTGTTATCCACTGCAGATGATCTTTTGCTTGTAAAACTTATGGATAGAACGGGTCCTGTAATTGACCAACTTTCAAATGAGATTGCATGTGAGATTATGCCTGCCATCGGACAATTCTTGCTGGACCAGAACCTGCATGATATCTGTTTCTCTTGGATTCAACAGTTGTTGGAGATAGTGTTCGATAATGGTCCCGAAACCTTTGGGATTCCAATGGAAGTTAAGAAAGAGCTCTTRCTGAATTTGCATGAAGCTTCCTCAGCTGACACAGCTGAGGAATGGGAAGGTATGCCACCAGATCAACTTCTATTGCAGTTGGCCTCGGCCTGGGAAATCGATCTGCAGCAGCATGACAAATAG 2805 0.4738 MSSQTHTRTSKPTTKPSQQQHSSSKTPQSHSHSSSTPSTTTTNASSLSTHLAMVELKQRILTSISKLSDRDTHQIAIEDLEKTILTLSPESIPMILNSLYDAASADPKPAVKKDSLRLLTFVCASHPDAAVPHLTKILAAVVRRLKDADSGIREACREAVGALAAQYLRGGSNGNGNGGGDNGAGXGSVVALFVRPLFEAMGEQNKGVQAGAAACLAKMVESAGGDGGGGGALVPAFQKICPRICKLLGSPNFLAKAAILPVVSSLSQVGAITPQSLEHLLPSIHDCLTSTDWATRKAAADALSSLALHSRGLVADGAASTVAVLEDCRFDKIKPVRDSMTEALQLWKNIAGKGDGSPDDSKPVSGDGDKSSASPLPETSAKLNLGDRKIDPSAKESPAGTSDVDSTGKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVLPRRGLNSSSSNNEEESGANAKDSKERNIPNHMLDRGNDRNSKQHSFDDFAPDKRMNAKELRAKAFDTDDRTEIDQREGSSNLAGQSEVSFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDGMVTLENRVRGLERIVEDMSRDLSISSGRRGSNFTGFEGSSRPSSKYNGFNDYSTAKYGRGGDGRTPFSERFSQADGNALGMRGRGPSWRSDTSEGWDFPXYGASRNGQISTRRAFGGSSVDARSPKSVPEGDQGGSRRAWDKAALPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTARATRVAIPEMTAEAMADDNVGQDRDAIWTSWSNAMHALQVGDIDSAFAEVLSTADDLLLVKLMDRTGPVIDQLSNEIACEIMPAIGQFLLDQNLHDICFSWIQQLLEIVFDNGPETFGIPMEVKKELLLNLHEASSADTAEEWEGMPPDQLLLQLASAWEIDLQQHDK* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0021 934 MobiDBLite consensus disorder prediction 474 533 - -
Amo11g0021 934 MobiDBLite consensus disorder prediction 451 544 - -
Amo11g0021 934 MobiDBLite consensus disorder prediction 1 46 - -
Amo11g0021 934 Coils Coil 586 606 - -
Amo11g0021 934 MobiDBLite consensus disorder prediction 349 408 - -
Amo11g0021 934 SMART TOG_3 79 339 IPR034085 -
Amo11g0021 934 Gene3D - 182 340 IPR011989 -
Amo11g0021 934 SUPERFAMILY ARM repeat 60 860 IPR016024 -
Amo11g0021 934 MobiDBLite consensus disorder prediction 661 725 - -
Amo11g0021 934 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 43 934 IPR033337 GO:0005874|GO:0008017
Amo11g0021 934 Gene3D - 40 169 IPR011989 -
Amo11g0021 934 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 43 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0021 Amo-Chr11 178919 184033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0021 - - adu:107477481 1638.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0021 11 178919 184033 Amo11g0021 11 178919 184033 ECH