Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0019 ATGGCTTCTATCACATGCATCACCCACCAACCCATTACCACTTCTTCTTCTTCTTCTTCTAAGTCTAAGTCCTGTTTGGCTTCCACAAACAGGTTGGGTTGTTGTGAGTTTCTTGGAAGCAGAAAAAGGGTTGGATGGTTGAGAGTCACAAACTCTGCTATTATTATGATTGGACCCTCCAATGGTTCCAAATCCACATGCTGGTTCAAGTTTGGTAAGAATGGTGTTGATGCTGAAGGTGCTGGAATTTATGGTAGCCAGAGCCGTGATGATTTTGATAGAGATGATGTTGAACAGTATTTCAATTATATGGGGATGCTTGCGGTTGAAGGAACATATGATAAAATGGAGGCTCTTCTAAACCAAAACATCCACCCTGTGGACATCCTACTGCTCTTAGCTTCCTCAGAAGGTGACAAGCCTAAAATCGAGGAACTCCTGCGAGCCGGAGCGAAATACGATGTAAAAGACGCCGATGGTCGAACGGCGCTAGATAGGGCTAGTGATGAAATCAAAGATTTCATTGTTAATTTTTCAGTGCAAAGAGCATGA 552 0.4312 MASITCITHQPITTSSSSSSKSKSCLASTNRLGCCEFLGSRKRVGWLRVTNSAIIMIGPSNGSKSTCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQNIHPVDILLLLASSEGDKPKIEELLRAGAKYDVKDADGRTALDRASDEIKDFIVNFSVQRA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0019 183 Gene3D - 87 181 IPR036770 -
Amo11g0019 183 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 183 IPR044242 GO:0006886|GO:0009570|GO:0090391
Amo11g0019 183 SUPERFAMILY Ankyrin repeat 106 168 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0019 Amo-Chr11 163229 165584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0019 - - aip:107632092 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0019 11 163229 165584 Amo11g0019 11 163229 165584 ECH