Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2572 ATGGAGGAATTAAAATTACCATTGAAGCAGAGTCTGGAAGGAAAGGAAAAGGAACAAGGTGAAGCTGCTGAACATTCTTCTGTGAAGAATGATACTACTGCAAAAGAAGTGAATCCATCACGGGATCGGAAAAGGCGGAGAAAGAAAGAGAAGAAACAAGGTGAAGCTGCTGAGCATAAAGGTTATCAGATTTCAGTGGATAATTGTTCGCCACAGACTGATGCCCCTTCTGAGAAGATAAATTCATCACCGAAGCCGAAAAGGGAAAGAAAGGAGAAGAAACCGGTTGAAGCTGTTGAGCATAAAGATCAAGGTCCTGATGTTTCACTTGGTAAATCTACTCCAAATACTGATATGGATAATGAATTTTCTAATATTGATGCTACTAGAGAGGATGTAAGTTCATCATCGAAGCGGAAAAGGAAGAGAAAGAAGAAGAAACAAGAAAAAGCTGTTGAAGATAAAGGCCCTCGTGCTTCACTGGATAAGAATTCTCAGAAGATTGATGATACCGCAGAGGATTCGTTAAACATATCCCCAGCTTTACCTAATCCTTTAGGCTCCCAAGATATTGTAGAATGTAGTTCTAAGAAGAGAAACAAAAGAAGGAAACGGCAGAAGACAAAATATAATGCTGTTGAAAGCATTGTCAACACTAATGATGTGCCAAAAGATACCTTTTCATCAAAATTTTGTACACCTGCCTTGCATATGCCTTCAGAACATCCAATTCAATTTGGGTCCGCTGATCCTATAAGAGGACAATCTTGTGCGGAGACAAATATTTGTCAGCAAGACAATGACAAAGGGGATCAGCATATACCAATAAAGGAAGCGGAAAACACCAGTGGGGAGTATGTTGTTAAAGACATAAGCCGGTCCTACAACTCAAAGAATAAGCTTCTTATCCTTGACATGAATGGACTTCTAGCTGACTTTGTCAAAAAGGTTCCTCAAGGAAGTAAAAGTCCGGATTTTAAAATTTATGGGGGAAGAAAAGGGTCGATAAAAGTTTTCAAGAGGCCCTTCTGTGATGAGTTTATACAGTTTTGTCTTGACAGGTTTCATGTGGGTGTTTGGTCATCTAGAAAGAAGAAAAATCTTGGTAGAGCAGTCAACCAAATTTTTGGGGAATCAGCATCCAAACTGCTCTTTCAATGGGATCGGTCCCACTGTACGAAAACAGGATCTTGTACCCTTGAGGACAAATTCAAGCCAATTGTGTTCAAGGAACTTCGAAAGTTATGGGAAAAAGTGGATGCCAGTCTTCCATGGAAGAAGGGAGAGTTTAATGAGTCAAACACATTATTGTTGGATGACTCCCCTTACAAAGCATTACTGAATCCTAGGAACACAGCAATATTTCCCAATCCTTACCATATTGATGATGTTGATGACACATCACTAGGGCTGGGAGGTGATCTTCATATGTACCTTGAAGGGCTGGCTGGGGCTGAGAATGTTCAAGAGTATGTGGCATCACATCCATTTGGCCAAAAGGCCATAACCGAAACACACCCGTCTTGGGATTTCTATCGCAAAGTTATTGAAGCAGTTAAACGCAACAAAATTGCTGCTCAGATGCGGGCTATGTCTAGGGGACAATTGAAGAGCTCCACCGTAACAGGCGAAAATACTGTCCATTTGCTGCCTGCTGCCGGCGATCCTCCACAAGAGCCCACAGCACTTGTTGCTAGTGCCACCGGTGATCCTCAGTTGACCAAGGCGCCACCACCTCCCACTACCCGAGATACACTACAATTGACTGATCCAGTGCTACTTCCTTCCACAGCCACTGCGGCAATGCTTCCTTAA 1815 0.422 MEELKLPLKQSLEGKEKEQGEAAEHSSVKNDTTAKEVNPSRDRKRRRKKEKKQGEAAEHKGYQISVDNCSPQTDAPSEKINSSPKPKRERKEKKPVEAVEHKDQGPDVSLGKSTPNTDMDNEFSNIDATREDVSSSSKRKRKRKKKKQEKAVEDKGPRASLDKNSQKIDDTAEDSLNISPALPNPLGSQDIVECSSKKRNKRRKRQKTKYNAVESIVNTNDVPKDTFSSKFCTPALHMPSEHPIQFGSADPIRGQSCAETNICQQDNDKGDQHIPIKEAENTSGEYVVKDISRSYNSKNKLLILDMNGLLADFVKKVPQGSKSPDFKIYGGRKGSIKVFKRPFCDEFIQFCLDRFHVGVWSSRKKKNLGRAVNQIFGESASKLLFQWDRSHCTKTGSCTLEDKFKPIVFKELRKLWEKVDASLPWKKGEFNESNTLLLDDSPYKALLNPRNTAIFPNPYHIDDVDDTSLGLGGDLHMYLEGLAGAENVQEYVASHPFGQKAITETHPSWDFYRKVIEAVKRNKIAAQMRAMSRGQLKSSTVTGENTVHLLPAAGDPPQEPTALVASATGDPQLTKAPPPPTTRDTLQLTDPVLLPSTATAAMLP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2572 604 MobiDBLite consensus disorder prediction 1 40 - -
Amo10g2572 604 Pfam NLI interacting factor-like phosphatase 300 488 IPR004274 -
Amo10g2572 604 ProSiteProfiles FCP1 homology domain profile. 295 482 IPR004274 -
Amo10g2572 604 MobiDBLite consensus disorder prediction 109 123 - -
Amo10g2572 604 MobiDBLite consensus disorder prediction 551 604 - -
Amo10g2572 604 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 23 523 - -
Amo10g2572 604 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 23 523 - -
Amo10g2572 604 MobiDBLite consensus disorder prediction 65 80 - -
Amo10g2572 604 SUPERFAMILY HAD-like 292 493 IPR036412 -
Amo10g2572 604 MobiDBLite consensus disorder prediction 579 594 - -
Amo10g2572 604 Gene3D - 257 499 IPR023214 -
Amo10g2572 604 MobiDBLite consensus disorder prediction 171 193 - -
Amo10g2572 604 MobiDBLite consensus disorder prediction 81 107 - -
Amo10g2572 604 MobiDBLite consensus disorder prediction 1 209 - -
Amo10g2572 604 SMART forpap2 298 466 IPR004274 -
Amo10g2572 604 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2572 Amo-Chr10 88619658 88624371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2572 - - aip:107623105 1072.38