Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2545 ATGGAAATGGAAAAGGGAAACGGCAGAGAACATTCCCCGCCAAAAATGGCGGCAGAGAGCAACGACATTGAAATCCAAGTCCGAACCCTAACCGCCGAATCCATCACTATCCCAATCCCTGCTTCCGCAACCGTACAACGCCTCAAGCTTCTCCTCAACCATTCATTCCCACCCGCCACCAACTCCTCCCATTTCCACCTTTTCTTCAAGGGTGAGAAATTGAGACCGCAGGCTCAGATTGGATCTTACACAATCCACAATGGGGAGTTTCTTGTACTCGTTCCATTTGCTAAGAAGGATTCCAAAGCTCACAAATCGGACTCACTTAATGCTCCTTCAACTCCCTCTAATGCTGCTCGTGGTGGTGATTCAGCTACCGATCTCGCGGATTCAATGTGGTCTAATATAAAGGAGGATCTATTGCATTTGCGCGAGGCCACTGAAAGTGATACTTTGGATCATGATAATAGCTCTGGTTTCGAGTTCAGGACGGTTGCTTCGGAGCCAAGAAAAGAGAAAGTGGATTATGAGGTCAGTTGGAATCAGGCTTCGAGGGCAAATGACAGAGATGCTGATAACCGGATTGAGCTTCCATATCATCTCATATTGAACACACTGGAGTGTACCAGTGAGGGTGCCCTCGGCAAGCATAATTGCGAGGTCTTTTTGAAGGTTTTGGACTCCGTGAATTGTTTGTCAGACCTGCCTCTGGGACACTGCAAGTTGTTCAGAAGAGCTCGTTCGCTGGGAGGTGATGGTGGATTGCAGCTAGGTGCCAATGGTAGTAGTAGTTCATGCTTGTGTCCTGCATGGTTGAAGATTGTAATGAAAGCATTTGCTTTCATAAACATCTTGTCCGGGTTTCTTCATTTGCAGGGTAGGAAAATGACCTTGCGTCTGCTGGAAGAAGCGTTGAATGAGCTTGGAATGTTCGGAGTCAAAATTGGCCTCCAGGACGTGAAGCATCTTCCGCTTCTCTCACCTCAACTAGTGTGCTTTGAAAGTGACATAGAGAAGGCAAGTTTTGGCAATGTCATTTTTGTCATTAACCATTCATCAAGTGATGAAGAACAAATTGAAATCAATCCTAAAACAGCTCTATCAAAGATTGTTCGGACATTGAAGAGTAGGGATAGTTCTTTCCGAAATAATCTGTGGAAGGCTTTTGAGCAGCTTCCGTTTATTTCAGGAGATCAGCTGACTATGGGAATTTCCTTGGAAAAATTGCTTGCAATATGCAAAGACCATTATTTTGTTGTAAATGAAAACAAATCAAAACGTTTAAAGAGAAGCTTGAATACCACAAAACCTGATTCAAATCACATTCGGTGTCATGACACAAAGGCACTGCTAGCTGTGGACATGGTTGAACACCTTGAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATAGGCCCTAGAAATGCCATTCATGCAGAGATCCCAACTGAACTATCGGAAAAGATGAGATCAGCACTGAAGTGTATAGGAGTTTCAAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTTCATGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTCTTTGCTATAACCTGCCAGTTCTAGAAGTTTTACTGAATAATCTGTCATCATGTGCTCTTTACATATTTCCTACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTGTTAAACATGACAAAAGGATTTGATGTTGAGTTAAATATTGGTATATATGATGGTGACACTTCCCACAGTGACAGGACTTGGCTACGAGACAATTCTAGATTGTTGATAACAAATCCAGATATGTTACACATATCGATCTTGCCCCACCATCGTCGATTTAGTCGGATTTTATCAAATCTAAGGTTTGTGATAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGTCATACTTCCCTTATATTAAGGAGGCTCAGGCGACTGTGCTCGCATGTATATGGATCTGATCCTTCCTTTGTTTTTTCTACTGCAACTTCTGCTAATCCAAGTGAGCACTCTATGGAACTTGCAAATTTACCAGCACTTGAGCTATTTCAGAATGATGGAAGTCCATCTGCAAGGAAACTTTTCATCCTTTGGAATCCTAGTCTGCATCCGAAAGCTATGGTGAAGAAAGCCAAGTCTGTTATCCATGCTGATAATTTGGAAGACGAAAGTGACAATTTTGTTCGTTCAAGTATGAATGCCATGAGCCCTTTTGTTATTTTCGCAGCCCAATTGTGGATGTTTCGCGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCACCATCGCATTTTGTAAATCAAGGAAACTTTGTGAGCTTGTTTTATCATATACGTATATGTGAAATTCTTCTCGAAGCAGCCCCGCATCTGGTTCATTCCATCTGTGCATATCGTGGTGGCTACATCGCAGAGGAAAGAAGAAAAATAGAGACTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAATTGGGCATTGATGTTGGAGAAATTGATGTGACTCTGCATCTAGGATTTCCAGGTAGTATTGCAAGCTTGTGGCAACAAGCCGGTAGGGGTGGGAGGAGAGATAGGCCTTCTCTTGCTGTCTATGTTGCCTTTGGTGGGCCTCTTGATCAGTACTTCATGAAACACCCTAAGAAACTTTTTGAAAGGCCAATTGAATGCTGTCACATTGATTCCCAAAACAAGCAGGTTCTTGAACAGCATTTGGCCTGTGCAGCTCATGAACACCCTCTGGCTGTGCAGTATGATGAGAAGTATTTTGGTTCTTGCTTAGAGAATGTTTTAAATTCTCTAAAAGCTAGAGGATATTTGAGTCCTAATCAGTCATCTGATTCTTCTTCTAGAATTTGGAACTACATTGGTAATGAGAAATATCCTTCTCATGCGGTCAATATCCGAGCAATAGAAACCGTAAGATACAGTGTCATAGATCAGAGAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAGGGCTTTCTTTCAGGTATATGAAGGTGCTGTGTACATGTGTCAAGGGAAAACCTATTTGGTCGAGAAATTAGATCTGTCTAGCAAGACCGCTTTCTGCAAAGTGGCTGATCTGAAGTATTATACAAAAACTCGAGATTACACCGATATTCATGTCACTGGGGGTAATATTGCTTATCCTACAGGAGTTTTGAACATGTTTCCTAAAACAAATGCGCGGGCTCATATATGCAAAGTAACAACTACATGGTTTGGTTTTTATCGTATTTGGAGAGGGAGCAATCAAATCTTTGATGCTGTTGACCTAGCCCTTCCTCAATATTCATACGAGTCACAGGCAGTTTGGATTCCAGTGCCACAATCTATCAAAGAAGTAGTACTCAAGAAAAATTATGATTTTCGTGGAGGTTTGCATGCTGCTTCGCATGCGGTTTTAAATGTAGTGCCTTTACACATAACATGCAACTTATCTGACTTGGCTGCCGAGTGCCCGAATCCTCATGATAACCGCTATTACCCAGATCGAATTCTCATTTATGATCAACATCCTGGAGGGTGTGGGATTTCAGTTCAGGTTCAACCGCGTTTCACCAAGTTCCTGGAAGCTGCACTTGATCTTCTCACTTGTTGCCGCTGCTCAGCAGAAGTTGGTTGTCCTAATTGTGTTCAGAGTTTTGCTTGCAATGAGTATAACGAGGTCCTACACAAGGATGCGGCCATTATGATTATCAAGGGTGTTCTGGAAGCAGAAAATGTGATCAATGCTGAGGAGTCACCTTTTTTATGA 3816 0.4216 MEMEKGNGREHSPPKMAAESNDIEIQVRTLTAESITIPIPASATVQRLKLLLNHSFPPATNSSHFHLFFKGEKLRPQAQIGSYTIHNGEFLVLVPFAKKDSKAHKSDSLNAPSTPSNAARGGDSATDLADSMWSNIKEDLLHLREATESDTLDHDNSSGFEFRTVASEPRKEKVDYEVSWNQASRANDRDADNRIELPYHLILNTLECTSEGALGKHNCEVFLKVLDSVNCLSDLPLGHCKLFRRARSLGGDGGLQLGANGSSSSCLCPAWLKIVMKAFAFINILSGFLHLQGRKMTLRLLEEALNELGMFGVKIGLQDVKHLPLLSPQLVCFESDIEKASFGNVIFVINHSSSDEEQIEINPKTALSKIVRTLKSRDSSFRNNLWKAFEQLPFISGDQLTMGISLEKLLAICKDHYFVVNENKSKRLKRSLNTTKPDSNHIRCHDTKALLAVDMVEHLEKGIGSEGQIVHIEDIGPRNAIHAEIPTELSEKMRSALKCIGVSKLYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVLEVLLNNLSSCALYIFPTKALAQDQLRSLLNMTKGFDVELNIGIYDGDTSHSDRTWLRDNSRLLITNPDMLHISILPHHRRFSRILSNLRFVIIDETHTYKGAFGCHTSLILRRLRRLCSHVYGSDPSFVFSTATSANPSEHSMELANLPALELFQNDGSPSARKLFILWNPSLHPKAMVKKAKSVIHADNLEDESDNFVRSSMNAMSPFVIFAAQLWMFRAFLQKWFSMVFAPSHFVNQGNFVSLFYHIRICEILLEAAPHLVHSICAYRGGYIAEERRKIETAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFERPIECCHIDSQNKQVLEQHLACAAHEHPLAVQYDEKYFGSCLENVLNSLKARGYLSPNQSSDSSSRIWNYIGNEKYPSHAVNIRAIETVRYSVIDQRKNEVLEEIEESRAFFQVYEGAVYMCQGKTYLVEKLDLSSKTAFCKVADLKYYTKTRDYTDIHVTGGNIAYPTGVLNMFPKTNARAHICKVTTTWFGFYRIWRGSNQIFDAVDLALPQYSYESQAVWIPVPQSIKEVVLKKNYDFRGGLHAASHAVLNVVPLHITCNLSDLAAECPNPHDNRYYPDRILIYDQHPGGCGISVQVQPRFTKFLEAALDLLTCCRCSAEVGCPNCVQSFACNEYNEVLHKDAAIMIIKGVLEAENVINAEESPFL* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2545 1271 SUPERFAMILY Ubiquitin-like 20 95 IPR029071 -
Amo10g2545 1271 MobiDBLite consensus disorder prediction 1 20 - -
Amo10g2545 1271 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 513 694 IPR014001 -
Amo10g2545 1271 PANTHER ATP-DEPENDENT HELICASE HRQ1 36 1267 - -
Amo10g2545 1271 SMART ultradead3 501 707 IPR014001 -
Amo10g2545 1271 Pfam Ubiquitin family 25 94 IPR000626 GO:0005515
Amo10g2545 1271 Pfam Helicase conserved C-terminal domain 793 873 IPR001650 -
Amo10g2545 1271 CDD Ubl_ubiquitin_like 25 94 - -
Amo10g2545 1271 SMART helicmild6 794 875 IPR001650 -
Amo10g2545 1271 Pfam DEAD/DEAH box helicase 507 676 IPR011545 GO:0003676|GO:0005524
Amo10g2545 1271 Gene3D - 23 111 - -
Amo10g2545 1271 ProSiteProfiles Ubiquitin domain profile. 23 94 IPR000626 GO:0005515
Amo10g2545 1271 MobiDBLite consensus disorder prediction 107 121 - -
Amo10g2545 1271 MobiDBLite consensus disorder prediction 103 125 - -
Amo10g2545 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 882 IPR027417 -
Amo10g2545 1271 MobiDBLite consensus disorder prediction 1 17 - -
Amo10g2545 1271 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 759 918 IPR001650 -
Amo10g2545 1271 CDD SF2_C_Hrq 791 884 - -
Amo10g2545 1271 CDD DEXHc_Hrq1-like 505 686 - -
Amo10g2545 1271 Pfam MrfA Zn-binding domain 1150 1232 IPR018973 -
Amo10g2545 1271 Gene3D - 783 943 IPR027417 -
Amo10g2545 1271 Gene3D - 478 693 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2545 - - adu:107470956 2405.56