Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2496 ATGGCCGTCGATGACAAGTGGTGCGTCGTCACCGGAGGTCGCGGCTTCGCCGCCCGCCACCTGGTGGAAATGTTGATCCAAGACAACACCTACTTCGTTCGCATCGCCGATCTCGGAGCCACTATCGAACTCGAACCGTCCGAACAACTCGGGACACTAGGCCAAGCCTTGAGCTCTGGTCGCGCCCAATACGTCTCTCTCGATCTTCGTAACAAGGAACACGTCCTCAAAGCATTGGAAGGTTGTGAGATTGTTTTCCACATGGCTGCTCCAAACTCATCCATTAACAACTATCAGCTTCATCATTCTGTCAATGTCCAAGGAACACAGAATGTCATTGATGCTTGTGTTCAACTTAGAGTGAAGCGGCTTGTTTACACCAGCTCATCTAGTGTTGTATTTGATGGCGTTCATGGAATTCATAATGGAAAGGAATCAATGCCCTATCCACCTAAGCATAATGATCATTATTCTGCCACTAAAGCTCAGGGTGAGGCTTTGGTTTTGAAGGCTAATGGAACTAGTGGGCTCCTGACTTGCTCGCTACGTCCTAGTAGCATTTTTGGGCCTGGTGATAGACTGATGGTGCCTTCGTCAGTTGATGCTGCCAAGGCAGGGAAAACCAAGTTCATTATTGGTGATGGCAATAACATGTATGATTTCACTTATGTTGGAAATGTGGCTCATTCCCATTTATGTGCTGACCGAGCTCTGGCTTCAGAGGGGGAAGTTTCAAAAAAAGCTGCAGGAGAGGCATATTTCATAACAAATATGGAACCTATAAAATTTTGGGAATTCATGTCACTTATTCTAGAAGGTCTCGGATATGAAAGGCCAAGAATAAAGATCCCTGCCTTTGTTCTCATGCCAATTGCACTATTGGTGGAGTATACATATAAGCTGCTAGGTCCATATGGTATGAAGGTGCCTCAGTTAACACCTTCAAGAGTAAGACTCCTATCTTGCAACAGAACTTTTGATTGCTCAAAAGCAAAGGAGCGCCTTGGATATGAACCCATTGTAACGCTAAAGGAGGGTTTGCGTAGGACAATTGATTCATTTTCACACTTGAGGGCTGAAAATCAACTCAAGCCCAAAAGAGAAGGTCCCTCGAAAGCTTCAGTATATCTTGGGAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCGAACGATCACCACATTGTTAGTCTTGATTGCAATATACTTAAGCTTCATTGCACCCGGGAATACTTTCATTACTGCTCTTTCAAAGCTTCTGTTGTTCGTATCGATCTTTTTATTCATTCATGGGATTCTACCGGCAAAAGTATTGGGGTACACTGTTCAGAAAATGCCCAAATCCTGGTTTCACATATCGGAAGACATGTCACATCAACTTGCTGTCTCCGTGGTATCAGTATGGAATATTCCTATGAATGTTTTGAAATCCCTTGCACAAGGGACCGAGTGGATGCTATTCTTTAAGGTTGTTCTCTCTTCGCTCCTTCTTAGCTTCTTTGGTGCATTTTCACTTCAGAACTTATATAAGATAGGACTTACCACTGCATTTATTGCTTTCTACATTTATGAAAAGAAGGAGGAAGAAATTGATGACTTATTCATAAAAGCACTTTCTTTTGGGTGCAAATTGAAATCTGATGCCATAAGGAAGTTCCTTCCTTCTAAGAAGAGTGAGTGA 1689 0.4328 MAVDDKWCVVTGGRGFAARHLVEMLIQDNTYFVRIADLGATIELEPSEQLGTLGQALSSGRAQYVSLDLRNKEHVLKALEGCEIVFHMAAPNSSINNYQLHHSVNVQGTQNVIDACVQLRVKRLVYTSSSSVVFDGVHGIHNGKESMPYPPKHNDHYSATKAQGEALVLKANGTSGLLTCSLRPSSIFGPGDRLMVPSSVDAAKAGKTKFIIGDGNNMYDFTYVGNVAHSHLCADRALASEGEVSKKAAGEAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAFVLMPIALLVEYTYKLLGPYGMKVPQLTPSRVRLLSCNRTFDCSKAKERLGYEPIVTLKEGLRRTIDSFSHLRAENQLKPKREGPSKASVYLGSGRVADTLLWKDRKRTITTLLVLIAIYLSFIAPGNTFITALSKLLLFVSIFLFIHGILPAKVLGYTVQKMPKSWFHISEDMSHQLAVSVVSVWNIPMNVLKSLAQGTEWMLFFKVVLSSLLLSFFGAFSLQNLYKIGLTTAFIAFYIYEKKEEEIDDLFIKALSFGCKLKSDAIRKFLPSKKSE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2496 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 359 - -
Amo10g2496 562 Gene3D - 2 358 - -
Amo10g2496 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Amo10g2496 562 Pfam Reticulon 382 538 IPR003388 -
Amo10g2496 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 359 - -
Amo10g2496 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 355 IPR036291 -
Amo10g2496 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2496 Amo-Chr10 86861451 86870998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2496 9 371 Lipid Metabolism Gene Families AT2G33630 31.234 1.70e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2496 K23558 - gmx:100816854 897.886