Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2476 ATGGGCATAACAGAAGCATGTTCAAGGTTCATTGTTGACTTCTTGCAAGCATTCAAACACTCATCACCACCAAGCTCAATTCATGATGAGCTTGATCAMAATCACCATAGCCCTGATTGCAAGCCCCAGAATTYGCTAAAGCTCGAYGACAACACGGTTCGCGCCCTCATGACTGTGTTTGGCATGCAAAACAATGGAAGAATCAAGAAAGAAAATGCTAGAAGAGTTGTGGAGAAGCTTGGTTTGGTGCATGACAAAGATAATAACAACAAGGCCTCATCATCACCATCAAGATTTGAGCTTCATGGTGATGGTGGATTGTTGGAGGGCGACGAAGTGCCGGTAGAAGAGGTTCTTGGTGATTTGGAGGACATGTCAAAGCGCAATGAGCTCTTGCATGAAGCATTCAAGATCTTTGATGAGGATGGAGATGGTTACATTGATGCAATGGAGTTGAAGAGGGTGCTTGATTGTCTTGGTTTGGATAAGGGTTGGGACATGAACACAATTGAGAAGATGGTTAAGGTTGTTGATTTGAATCTTGATGGCAAGGTTGACTTTGGTGAGTTTGAGTTGATGATGGGATAG 588 0.432 MGITEACSRFIVDFLQAFKHSSPPSSIHDELDXNHHSPDCKPQNXLKLDDNTVRALMTVFGMQNNGRIKKENARRVVEKLGLVHDKDNNNKASSSPSRFELHGDGGLLEGDEVPVEEVLGDLEDMSKRNELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKVVDLNLDGKVDFGEFELMMG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2476 195 Pfam EF-hand domain pair 131 194 IPR002048 GO:0005509
Amo10g2476 195 PANTHER CALCIUM BINDING PROTEIN 118 194 - -
Amo10g2476 195 SUPERFAMILY EF-hand 46 194 IPR011992 -
Amo10g2476 195 Gene3D - 39 195 - -
Amo10g2476 195 MobiDBLite consensus disorder prediction 23 43 - -
Amo10g2476 195 ProSitePatterns EF-hand calcium-binding domain. 140 152 IPR018247 -
Amo10g2476 195 SMART efh_1 169 195 IPR002048 GO:0005509
Amo10g2476 195 SMART efh_1 131 159 IPR002048 GO:0005509
Amo10g2476 195 ProSiteProfiles EF-hand calcium-binding domain profile. 165 195 IPR002048 GO:0005509
Amo10g2476 195 ProSiteProfiles EF-hand calcium-binding domain profile. 127 162 IPR002048 GO:0005509
Amo10g2476 195 PANTHER CALCIUM BINDING 118 194 - -
Amo10g2476 195 MobiDBLite consensus disorder prediction 86 106 - -
Amo10g2476 195 CDD EFh 132 190 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2476 Amo-Chr10 86615926 86616753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2476 132 194 EF-hand Containing Proteins AT4G20780 58.730 1.37e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2476 - - adu:107470962 381.333