Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2463 ATGGAAACGACACGCCGCCGTCACGACCTCCATTTACTGCATCCATCCTCTCTGCAAACCAGCAACTTCAACGGTTTTGCGATCCTGCAATTCGCCCTTCCCCCACCGCAACTTCACCGTCGGCGAGAAACAAAGCTCGCAGTCTCGGTTTACAGCACCATCGGAGAACTTCTGCACACTCCTAATATCTCGAATCCTCTACAATCCAAAAGGAATTTTTCGGTGCGTAAAAACCCCATGGCCGCTGAAGAGCCTAGCAAATTAGATGATCCTGAATTTCAGTGGGGAAAAAAGAAAGGTGTTGGTGGTAAGAAGAAGGATGTACAATTTTACTCGTCTTTTACCTATGATGGTGTAGAATACACACTGTATGACTCTGTGTATCTCTACAAGGAGGGTGAACCTGAGCCTTATATCGGGAAGCTTATTAAGATATGGGAAACTGCTGATAAGGCAAAGAAAGTGAAGGTTCTGTGGTATTTCCGTCCGGGTGAGATTCGGAACTTTCTCGAAGGATGCGAGGTTGGCGGGAACGAGCTGTTCTTGGCGTGTGGAGATGGAGTAGGGCTTGCAAATCTAAATCCACTGGAAGCTATTGTTGGCAAATGCAATGTTCTTTGCATTTTGAAGGATAGCAGGAATCCACAGCCATCAAATGAAGAACTACATCTGGCTGAATTTGTATTCTATCGATTCTTTGATGTAGGGCAGAGAAAAGTATTGGATAAGATAGATGATATGATTGCTGGATTTCAAAAAGAATCTCCCGGAGTTACTCCAAGGCCGTATGTTGAGGATGGCCCTTCCAAGAAGTTAAAGACTACTGAGAAACTCTCAAAACCCCCAAGCGACAAGTTTCGAAAGGAATCTCCCAGAGTTTCTCCATCTGAGGAACCCAAGTTGGATTGCAATGTAGCCGAAGTGACTAGAAGACCCGATGTTCCTTGGGAAGAAAGAATGAAAACTGCTCATGAACGAGGAAAACTTGTGCTACTTGAAAATTTGGATTCATCTTTAACATCAGAACAAGTACAGGATATCATTTTTCAAGGCTTTAAAGAAAGTTGCACTGCACACATGATCCAGAAAACAGCGTGTGCTAGCCCTCATTCTGGTCAAGCTTTTGTTATATTTAAAAAAAAGGAAACAGCAGATATGGTTGTTAAAAAATTACAGGAGGATTCTCTATTAATCCCACTTGTTGGAAGCATTGGGCGTCCTTGCTTTCCAGGGAAGAAGCCAGCATTTTATGGTCATTATTTTCTAGATCAAAGTCGAATGCTGCAACAACGTGAAATGAAAAATGCTGTATCTACTTCACATTGCTCACAGCCCAACAATATTGAATATGATATGGCTATGGATTGGTGCTTACTACAAAAAAGAGCAGAAAAAGCATGGTCAATATTATATCAGTTTGCGGAGTATCCCAACAAGGATGAGAGCATTTCATTCAGCAACGAAATTATTTTAAACAGCTTCGTTGAGGCAGTGGCATGCAGTTCAGCAGTTGTGAATATTATTTTCTTGGAGTTTGGCTCCGGAACCAAGTCAATGAACAGTTGTTCCACCTTCTATTGCGACTCCAAGCAAGCTGTTAAAAGATTTTTTGCAAGTTTAGATCGTCTGAAGGGACCTACAAGTCTCAGCCACAACCCAATTGTCACCATACATTTTATTGGGTAA 1686 0.4223 METTRRRHDLHLLHPSSLQTSNFNGFAILQFALPPPQLHRRRETKLAVSVYSTIGELLHTPNISNPLQSKRNFSVRKNPMAAEEPSKLDDPEFQWGKKKGVGGKKKDVQFYSSFTYDGVEYTLYDSVYLYKEGEPEPYIGKLIKIWETADKAKKVKVLWYFRPGEIRNFLEGCEVGGNELFLACGDGVGLANLNPLEAIVGKCNVLCILKDSRNPQPSNEELHLAEFVFYRFFDVGQRKVLDKIDDMIAGFQKESPGVTPRPYVEDGPSKKLKTTEKLSKPPSDKFRKESPRVSPSEEPKLDCNVAEVTRRPDVPWEERMKTAHERGKLVLLENLDSSLTSEQVQDIIFQGFKESCTAHMIQKTACASPHSGQAFVIFKKKETADMVVKKLQEDSLLIPLVGSIGRPCFPGKKPAFYGHYFLDQSRMLQQREMKNAVSTSHCSQPNNIEYDMAMDWCLLQKRAEKAWSILYQFAEYPNKDESISFSNEIILNSFVEAVACSSAVVNIIFLEFGSGTKSMNSCSTFYCDSKQAVKRFFASLDRLKGPTSLSHNPIVTIHFIG* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2463 561 Gene3D - 311 400 IPR012677 -
Amo10g2463 561 PANTHER PROTEIN ANTI-SILENCING 1 265 472 - -
Amo10g2463 561 PANTHER PROTEIN ANTI-SILENCING 1 84 251 - -
Amo10g2463 561 PANTHER PROTEIN ANTI-SILENCING 1 265 472 - -
Amo10g2463 561 PANTHER PROTEIN ANTI-SILENCING 1 84 251 - -
Amo10g2463 561 MobiDBLite consensus disorder prediction 266 296 - -
Amo10g2463 561 Gene3D - 89 243 IPR043151 -
Amo10g2463 561 MobiDBLite consensus disorder prediction 255 300 - -
Amo10g2463 561 Pfam BAH domain 120 242 IPR001025 GO:0003682
Amo10g2463 561 SUPERFAMILY RNA-binding domain, RBD 328 392 IPR035979 GO:0003676
Amo10g2463 561 ProSiteProfiles BAH domain profile. 119 244 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2463 Amo-Chr10 86422061 86436753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2463 - - aip:107621071 436.032