Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2453 ATGGTACTCCTTCACCTCCCCAAACTCCCTTCCACCATTCTAACTCCACTATCCACTTCTCCCATCTTTCTCCGCACTCATTTCCTAAACCCAAATCCAAACCCAACCAAAACCCCTCGCCCCCTCTTACTATTCTCCACCCTAACTCTTCCCGCCTCCGAACCCACACCGCTAGACCCTCACACACCCGAACCCACCCCCCACCTCCAACTCCCTCTCCACAAGCTCTTCGTTCCCCCCGAAACCCATGTCCCCCTCGACACCCCTACCCTCACCGCCAGAATCCTCAAGGGCTCCAACATTCTCCTCAGCAACTACGCCACCGACTCTCAGGTGGCGCAAGCGGAGTTCATCAAGAGCAGTGTTAGGACCGAGGACTGCCCCTCCGATGGCCTCCCTGAGTTTGCTCTCGTTGGACGCTCCAATGTTGGCAAATCCTCGCTCCTCAATTCCCTCGTTCGCCGCAAGAAGCTCGCCTTGACCTCCAAGAAACCAGGCAAAACACAATGCATTAACCATTTTCGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAGCTTAGAATGGATTGGGAAAAATTCACCAAGGACTATTTTCTTAACCGGTCAACCCTAGTTTCAGTTTTCCTTCTAATAGATGCCAGCATTCCTGCTAAACAAATTGATCTCGAGTATGCTAGTTGGTTGGGCCAGAATCAGATCCCAATGACCATAATCTTCACCAAATGTGACAAGCGGAAGAAGAAAAAGAACGGAGGCAAAAGACCAGAAGAAAATGTTAATGACTTTCAGGAATTGATACACGGCTTCTTCGAGACAGCACCTCCGTGGATCATGACCAGTAGTGTTACTAATCAGGGTCGTGATGAGATTCTTCTCCATATGGCCCAGCTAAGAAACTATTGGCTCAAGCATTAG 948 0.5 MVLLHLPKLPSTILTPLSTSPIFLRTHFLNPNPNPTKTPRPLLLFSTLTLPASEPTPLDPHTPEPTPHLQLPLHKLFVPPETHVPLDTPTLTARILKGSNILLSNYATDSQVAQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPQELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLEYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVNDFQELIHGFFETAPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2453 315 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 131 311 IPR030393 GO:0005525
Amo10g2453 315 Hamap Probable GTP-binding protein EngB [engB]. 120 309 IPR019987 GO:0005525
Amo10g2453 315 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 74 312 - -
Amo10g2453 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 311 IPR027417 -
Amo10g2453 315 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 115 303 IPR019987 GO:0005525
Amo10g2453 315 CDD YihA_EngB 134 308 IPR030393 GO:0005525
Amo10g2453 315 Gene3D - 106 311 IPR027417 -
Amo10g2453 315 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 74 312 - -
Amo10g2453 315 Pfam 50S ribosome-binding GTPase 135 252 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2453 Amo-Chr10 85875237 85878466 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2453 K03978 - pvy:116124464 469.159