Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2423 ATGATGTTTATCGCTACTTTTGGTACACTATTCATACTGATGGGAAGCTTCCCAGAGATAGAGCATGTGGTGGAAGTTCCACTCCTCTCCAAGGCCACTTCCACTACTTCCCACAACCACAAGGGTGGCTTCAGAACCTTGCCTTTCATCATAGCAAATGAGGCATTTGAGAGGCTGGCTAGCATTGGACTAATGCCTAACATGATATTGTACTTGACAAGAGAGTATGGWATGGAAACTGCTGCTGCCACCAATTTCCTCTTGTTATGGTCTGCTGCCACCAATTTCACACCCCTCATTGCTGCTTTYCTTGCAGACTCTTGTGTCGGTCGATATTCCATGATTGCTTSTGGTTCTGTTACTAGCCTGTTGGGAATGGTTCTTCTATGGTCAACAACCATGATTCCAAGGCAAACTTCCAACCAATTAACCAATGTCTATAACTCCACTTCAACAATGCAACTTTTGATCTTACATTCCTCTTTTGCCCTTATGGCCATTGGAGCTGGAGGCATAAGATCATCCTCTTTAGCCTTCGGTGTTGATCAGTTAAGCATGAAGGACAAAGATGGGAATGTTAAGGAAAGTTACTTCGGATGGTACTATGCTTCGGTCACATTGTCAATACTTCTTGGTCTAACTGGTGTTGTTTACATTCAAGAAACCATAGGATGGAAAGTGGGGTTCGGAATTCCTGTTATCTTAATGTTCATATCGACTATATCGTTTTTCTTAGCTTCTCCATTTTATGTCAAGCTAGAGACCAAAAAGAACATGGTGAGTGGGTTAGCTCAGGTCATTGTAGCCTCTTATAGAAATAGACTTGTTCAGTTGAATCAGGAATATGGAAATTTGACATACTACCATGAGAAGGATTCGATTCTCCTAGTGCCAAGTGAAAGTTTGAGGTTTCTCAACAAAGCATGCATGATTAAAGATCCCTCACAAGATCTCAAACCAGATGGAAGGCCTTTGAATCCATGGAATCTTTGCACAGTGGATCAGGTGGAAGAACTAAAGGCACTTCTCAGGGTAATTCCAATTTGGACAGCAGGAATCATGCTCACTGTGAATGTTAGCCAAGGTTCTTTCCTGGTGCTCGAGGCATCGTCCATGGACCGACACATCACTTCAAACTTTGAAATTCCTTCAGGCTCCTTTGGAACATTCATGATTATATCGGTAGTACTTTGGGTTATACTCTATGACCGTGTTTTAGTCCCGGCTGCATCGTTGATACTGGGACGGCCGGCATGCTTAGGATCAAAACAGAAAATAGGACTTGGCCTATTTTCATCTTGTGTTTCAATCGCATCATTAGCAATAGTAGAGAACATTAGGCGTGGGATTGCAATCGATCAAGGCTATTCGGAACAACCACAAGCCGTGGTGAACTTGTCCGCCCTATGGCTCCTGCCACGGCAAATCCTTGACGGATTGGCCGAGGCATCAGCCTGCATTGGACAAAACGAGTTCTTTCTGGCCGAGCTTCCCCAATCGATGTCTAGCTTGGCGTCCACGCTAGGTGGCCTGGWAATGTCTWTGGGGAATTTGGCAGCAAGTTTTGTTCTMAGTGGTGTTGATGGTGTTACTGGAGGAGGAGGAAATGAGAGTTGGCTTTCAAGCAACATAAACAAGGGTCATTATGATTACTATTATGCATTCATTTTTAGTTTGTGCSTTGCAAATTTTGGATATTTTATTTACTGTAGTAAAGCTTATGGCCCTTGTAAGGGTAATGGAAAGTATAATTTTAAGTAG 1761 0.4287 MMFIATFGTLFILMGSFPEIEHVVEVPLLSKATSTTSHNHKGGFRTLPFIIANEAFERLASIGLMPNMILYLTREYGMETAAATNFLLLWSAATNFTPLIAAFLADSCVGRYSMIAXGSVTSLLGMVLLWSTTMIPRQTSNQLTNVYNSTSTMQLLILHSSFALMAIGAGGIRSSSLAFGVDQLSMKDKDGNVKESYFGWYYASVTLSILLGLTGVVYIQETIGWKVGFGIPVILMFISTISFFLASPFYVKLETKKNMVSGLAQVIVASYRNRLVQLNQEYGNLTYYHEKDSILLVPSESLRFLNKACMIKDPSQDLKPDGRPLNPWNLCTVDQVEELKALLRVIPIWTAGIMLTVNVSQGSFLVLEASSMDRHITSNFEIPSGSFGTFMIISVVLWVILYDRVLVPAASLILGRPACLGSKQKIGLGLFSSCVSIASLAIVENIRRGIAIDQGYSEQPQAVVNLSALWLLPRQILDGLAEASACIGQNEFFLAELPQSMSSLASTLGGLXMSXGNLAASFVLSGVDGVTGGGGNESWLSSNINKGHYDYYYAFIFSLCXANFGYFIYCSKAYGPCKGNGKYNFK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2423 586 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 40 575 - -
Amo10g2423 586 Gene3D MFS general substrate transporter like domains 23 579 IPR036259 -
Amo10g2423 586 Pfam POT family 113 539 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo10g2423 586 SUPERFAMILY MFS general substrate transporter 40 565 IPR036259 -
Amo10g2423 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2423 Amo-Chr10 84831155 84841639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2423 41 584 Organic Solute Cotransporters AT1G52190 51.792 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2423 K14638 - gmx:100809846 828.55