Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2389 ATGATAGCATTCAGAGCGGTTCTTCACCTTCAAACACTTCCCATTCGGGTTTCCTCTACCCGACCCGCTTCCCTCTTTCTTCACCCACACAGTTTTGCTTTGCGGAACAGAAGCTTGTCGTTCATATCGCCACCGCCATTGTCATTGCCGCCATCTTTGGAAGCCGCAACTTTCTCCAATGGCAACTTACCATTCAGGAGGATATCCACTTTTCCTGCCGTTTGCATGGGCAGGCGCTCCTCCAAAATCGCTGGCAGAAAGGAAGCCCAAAATGCAAAAAAGGCTAAATTGTACTCGAGGATGGGAAAGGAGGTTGTGTCTGCTGTCAAGAAAGGTGGTCCAAATGTAACATCTAATCCATTGTTAGCCGCTATACTTGAGAAAGCCAAGGAGCTTGATGTGCCAAAAGATATAGTTGAGCGTAACATCAAAAGAGCTTCAGAGAAGGGACAGGAGGCTTATATTGAGAAAGTCTATGAGGTTTATGGCTATGGAGGGGTTAGTATGGTAGTTGAGGTCTCAACTGATAAGGTACATCGATCAGTGGCAAAGATTAGAGAAGTGGTGAAGGACTGTGGAGGAAAGATGGCAGACTCTGGATCTGTTACATTTAAGTTTAGACGTGTTCGGGTAGTAAATATAAAAGTCACTGATGCTGACAAAGATCAGCTGCTTTCCATTGCATTAGATGCTGGAGCAGAGGATGTAATTGAACCTTCAACTTATGAGGATGACACTGAAGAGGATAGGTCAGAAAGGTATTATAAAATTGTAGGTTCTTCTGATAACTATGCTACTATACTGTCAAAGCTGCGAGAGGAAGGCATAAATTTTGAGCCTGATAATGGTTCTGAATTACTTCCAAATGCTACAATTGAGGTAGATGATGAAGCTATGGACCTGAACAAGGAACTTATGAACAAATTACTTGAGCTTGATGATGTTGATGCTGTTTATACAGACCAGAAATAA 972 0.429 MIAFRAVLHLQTLPIRVSSTRPASLFLHPHSFALRNRSLSFISPPPLSLPPSLEAATFSNGNLPFRRISTFPAVCMGRRSSKIAGRKEAQNAKKAKLYSRMGKEVVSAVKKGGPNVTSNPLLAAILEKAKELDVPKDIVERNIKRASEKGQEAYIEKVYEVYGYGGVSMVVEVSTDKVHRSVAKIREVVKDCGGKMADSGSVTFKFRRVRVVNIKVTDADKDQLLSIALDAGAEDVIEPSTYEDDTEEDRSERYYKIVGSSDNYATILSKLREEGINFEPDNGSELLPNATIEVDDEAMDLNKELMNKLLELDDVDAVYTDQK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2389 323 Pfam Transcriptional regulator 80 321 IPR002876 -
Amo10g2389 323 SUPERFAMILY YebC-like 76 322 IPR029072 -
Amo10g2389 323 Gene3D - 157 320 IPR026564 -
Amo10g2389 323 PANTHER UNCHARACTERIZED 59 323 IPR002876 -
Amo10g2389 323 Hamap Probable transcriptional regulatory protein YebC [yebC]. 76 323 IPR002876 -
Amo10g2389 323 Gene3D - 92 152 IPR017856 -
Amo10g2389 323 PANTHER TRANSLATIONAL ACTIVATOR OF CYTOCHROME C OXIDASE 1 59 323 - -
Amo10g2389 323 Gene3D - 205 290 IPR026564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2389 Amo-Chr10 83111334 83115196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2389 - - ahf:112716106 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2389 10 83111334 83115196 Amo20g2876 20 129629306 129633231 hybridization