Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2262 ATGGCGTTTTTGAGATCTCAATCGCTCTCTGCGGTTGCTGTTCTTCTGCTACTCCTCATCCATGGAGCTCACTCCTTCTACCTCCCCGGCGTCGCCCCGCAGGATTTCCAGAAGGGAGATCAATTACAAGTGAAAGTAAACAAATTAACATCAACAAAGACCCAGCTTCCATACACATATTATTCACTTCCTTATTGTCGTCCAGAAAAAATACAGGATAGTGCTGAAAATCTCGGGGAAGTACTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTCAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAAACTTAAACTCGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAACGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAAAGGACCGATCAGGAGGATTCTTATTTTTATCAGCTCGGTTACCATGTCGGACTCAAAGGGCTGTACAGTGGGGTTAAGGAGGAGAAATTTTTTATTCACAATCATTTGGCATTTACTGTTAAGTTTCATAAAGATGCAGTGACGGAATCTGCTAGGATCGTGGGCTTTGAGGTTAAGCCATTCAGTATCAAACATGAATATGATGGTAAGTGGGATGAAAAGACTCGTCTAACAACCTGTGACCCCCATGCTAAACACACAGTTGTCAACTCCAACACTCCTCAAGAGGTTGAAGAAAACAAGGAGATTATCTTCACATATGATGTTGACTTCCAGGAAAGTGAGGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGTTAATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTCTCGGGAATGGTAGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAACTTGTCCATGGTGATGTGTTTAGGCCCCCTAACAACTCAGATTTGCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGATATTGGTAACCATGATATTTGCTGTGCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGCCTAATGACAGCCATGCTCTTGCTATGGGTTTTCATGGGAATTTTCGCTGGTTATGCTTCAACTCGCTTATACAAAATGTTCAAGGGAACGGAGTGGAAGAAAATGGCCCTCAGAACTGCAGTAGTGTTCCCTGGAATTGTATCTGCCGTTTTCTCTGTGTTAAATACTCTCATATGGGGCGAAAAATCATCTGGAGCTGTGCCATTTGGAACTATGTTTGCTCTGATCTTCTTATGGTTTGGGATTTCAGTTCCACTTGTTTTCGTTGGTAGTTATGTTGGGTTCAAGAAGCCAGCAATTGAAAATCCTGTGAAGACAAATAAAATCCCAAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTCTTCTCGGTTTTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAACTTTTCTTCATCCTCACTTCAATCTGGTTGAATCAGTTTTACTACATCTTTGGATTCCTCTTTTTGGTCTTCATCATCCTGATCATCACTTGTGCCGAAATAACCATTGTTCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACTTCTGGTTCTTCCGCACTTTATCTCTTCCTCTATGCCACATTCTACTTCTTCACCAAGCTTGAGATCACAAAGTTGGTATCTGCAATATTATACTTTGGGTACATGCTCATAGCTTCTTATGCGTTCTTTGTGGTAACCGGTACTATAGGATTTTATGCTTGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1920 0.4203 MAFLRSQSLSAVAVLLLLLIHGAHSFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYTYYSLPYCRPEKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCKLKLDAKTAKEFKEKINDEYRVNMILDNLPLVVPIKRTDQEDSYFYQLGYHVGLKGLYSGVKEEKFFIHNHLAFTVKFHKDAVTESARIVGFEVKPFSIKHEYDGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVDFQESEVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGTEWKKMALRTAVVFPGIVSAVFSVLNTLIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2262 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 9 639 - -
Amo10g2262 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 9 639 IPR004240 GO:0016021
Amo10g2262 639 SUPERFAMILY MFS general substrate transporter 277 462 IPR036259 -
Amo10g2262 639 Pfam Endomembrane protein 70 57 595 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2262 Amo-Chr10 79419004 79423052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2262 1 639 Miscellaneous Gene Families AT5G10840 83.901 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2262 K17086 - gmx:100780976 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3735 16 148732155 148736161 Amo10g2262 10 79419004 79423052 PCT
Amo10g2262 10 79419004 79423052 Amo16g3735 16 148732155 148736161 PCT