Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2098 ATGGAATCGGAGAAAACAAACTTTCAAAGCGTGACGATAGGATCATGTGCAAGACCCTCATGGTCCATCCTCTTTCTCCTCTTTACCCTCATCACCATCTTCTCCATTCAGCTCTCCACCACCACTCCCTACCTCTTTCCTCCCAACTGGGCCCTCATTCGCCCGCAACGATCCGTCCCTTCCTCCTCCGCATCGGATCCGATCACATGCTCCGGTTTCTTCAGGGCGCTTCCAAAGAGGAAGCTCGTCATGTCCATCAAGGACTTCGGCGGCGTCGGCGACGGCAAAACATCCAATACCGAAGCCTTCAGGAGAGCCATTCGCTACATGCAGCGCTTTCAACACCGTGGTGGGTCCCAGCTTAATATCCCTAACGGAACTTGGCTCACCGCTCCCTTCAATCTCACCTCTGATTTCACCCTTTTCTTGAACCAAGGTGCTCTTCTTTTGGCCTCTCAGGACGTAAAAGAATGGCCTATAATTGAGCCGTTGCCATCTTATGGAAGAGGAAGAGAGAGGTTAGGAGGAAGACATATTAGCCTTATACATGGAAATGGCKTCAAGAATGTTATCATCACAGGAGATAATGGGACAGTTGATGGTCAAGGGAAGATGTGGTGGGAACTTTGGTGGAACAGAACATTGGAGCACACAAGAGGCCACCTCCTTGAACTAATTAACTCCGATAATGTTCTCATATCAAACCTCACCTTTCGAAATTCTCCTTTTTGGACCATTCATCCTGTTTACTGCAGAAATGTTGTGATCAAAGGGATGACAATCTTGGCTCCTCTTAATGCCCCAAATACCGATGGCATAGACCCAGACTCAAGCACCAARGTATGCATAGAAGATAACTACATAGAAAGTGGAGATGATCTAGTAGCCATCAAGAGTGGTTGGGATCAATATGGAATCACCATGGCGCATCCTAGCACAAATATCATAGTGAGGAGAGTCTCAGGCACAACCCCAACTTGTTCCGGAGTTGGAATAGGCAGTGAGATGTCCGGAGGAATTTCGAATATKACAATTGAGGYTCTACATGTGTGGGATTCTGCAGCTGGTGTTCGGGTGAAATCCGATAAGGGTAGAGGTGGCTATATATCCAATGTTAGCATAAGCAACATAAAAATGGAAAGAGTGAAGATACCAATTAGGTTCAGTAGAGGTTCAAATGATCACCCMGATGATGGGTGGGATCCAAATGCTGTTCCAAMATTTAAGGACATCTCTATAAGCAACATTGTGAGTGTGAATTCGACCAAAGCACCGGTTTTAGAAGGTATAGAGGGGTCATCATTTGAAGGCTTATGCTTCAAGAATATCACACTGCATGGAATTGCCGCATCCACAAAATGGCATTGTGAATATGTATCTGGTTTTGCCACTAAGGTGTTTCCTGTTCCATGCCCCGATTTAAAGAACACTAGCAGTGATTCATCATGGTGTTCACCTTCTTGA 1464 0.4577 MESEKTNFQSVTIGSCARPSWSILFLLFTLITIFSIQLSTTTPYLFPPNWALIRPQRSVPSSSASDPITCSGFFRALPKRKLVMSIKDFGGVGDGKTSNTEAFRRAIRYMQRFQHRGGSQLNIPNGTWLTAPFNLTSDFTLFLNQGALLLASQDVKEWPIIEPLPSYGRGRERLGGRHISLIHGNGXKNVIITGDNGTVDGQGKMWWELWWNRTLEHTRGHLLELINSDNVLISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTKVCIEDNYIESGDDLVAIKSGWDQYGITMAHPSTNIIVRRVSGTTPTCSGVGIGSEMSGGISNXTIEXLHVWDSAAGVRVKSDKGRGGYISNVSISNIKMERVKIPIRFSRGSNDHPDDGWDPNAVPXFKDISISNIVSVNSTKAPVLEGIEGSSFEGLCFKNITLHGIAASTKWHCEYVSGFATKVFPVPCPDLKNTSSDSSWCSPS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2098 487 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Amo10g2098 487 SUPERFAMILY Pectin lyase-like 79 473 IPR011050 -
Amo10g2098 487 Pfam Glycosyl hydrolases family 28 181 460 IPR000743 GO:0004650|GO:0005975
Amo10g2098 487 Gene3D - 75 465 IPR012334 -
Amo10g2098 487 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 14 480 - -
Amo10g2098 487 PANTHER PECTIN LYASE-RELATED 14 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2098 Amo-Chr10 74990742 74994539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2098 1 485 Glycoside Hydrolase AT4G33440 64.815 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2098 - - ahf:112715929 978.008