Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2008 ATGAGAGGAACAATGGGAAATTCTCCTCATGCTGTTGAACCTCGACACCGTTTGCCTGCAACCATTGAAGATTTATACAAACGAAGATTGCCAAAAAATAACAAAGCAAAAGAGGTAGAGAAACCATTCCATTTAACTGTACAAGATAGGAGCTCAAGATGCAAGTTCTCATTCTTAAAACTTCTGTTATTGGTAACCATTTGTGGAACTTTTGTAACACTCCTCTACTCTCCAGAGGTCTACAATACCACCCATTTAACAACCTCTGGCTCTGTGTGGTTATGGGGTGGGTCGGATCCTAGATATATGGCGAATGTAGATACTCGTTTGAGTGATATTGCGAAAATCACCAAGAAATTAACAGGGAAAGATAAAGTTCAGGGCATTGGGCTTGTGAATTTCAACAAGACAGAGATAAGTGGTTTTGAGAATCTTAATCCTGATGCTACACATGTTGAATTGCACTTGGAGTATGCTGCAAGAAATGTGACATGGGAGTCCCTATACCCCGAATGGATCGATGAGGAAGAAGAGGAGGAAGTTCCCGTTTGCCCCTCACTGCCAAGTCTGAGGTCTCCCGGCATACGACTTAATCTCATCGCCGTCAAGCTTCCTTGCCGGAAAGGTGTTGGCAAGAATTGGTCTAGAGATGTTGCTCGTTTGCATCTTCAGCTCGCCGCTGCTCGCCTTGCAGCCTCTTTTAAAGGAAACTACACTGTGCATGTTCTGTTTGTTACCGATTGCTTCCCAATGCCGAATCTGTTTACCTGCAAAGAACTTGTTGGACGCGAAGGAAATGCATGGTTATACAGACCAAACTTGAGTGTTTTGAGACAAAAGGTTCAACTTCCTGTAGGATCCTGTGAACTCACAATTCCTATGAGGGGCAAAGAGTTGGTTTACAATGGAAATGCTGAGAGAGAAGCGTACGCAACAATTCTGCATTCAGCACATGTTTATGTGTGTGGAGCAATCGCGGCGGCGCAAAGCATCCGCATGGCCGGATCAAGTCGAGACCTTGTTATACTTGTTGATGAGACAATAAGTGGATATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTCAGGACAATAAAGAGGATCAGAAACCCCAAAGCCGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCCGCTTATGGCAACTAACAGATTATGACAAGATAATATTCATAGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTATTTGCCATGCCGGAAATCACTGCTACTGGAAACAATGCCACGCTTTTCAACTCTGGAGTCATGCTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTAATGGATCACATAAACGAGATTGAATCTTACAATGGAGGAGACCAGGGATACCTGAATGAGATATTCACATGGTGGCATAGGATTCCAAGACACATGAACTTCTTGAAGCATTTCTGGATCGGCGACGAAGAAGAGAAGAAAAAAATGAAAACCATGCTGTTTGGTGCCGAGCCTCCAATCCTCTATGTTCTTCACTACCTAGGCTTGAAGCCTTGGTTATGCTTCCGCGACTATGATTGCAACTGGAACTTTGACATATTCCATGAGTTTGCGAGCGACGTTGCGCACGCCAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGGTTCTGCAACAATTCTGTTTGCTGCCATCAAAGCAAAAGGCGCAGTTAGAATGGGATCGGAGACAAGCCGAGACAGCAAACTACACAGATGGCCACTGGAGACTCAAAATTAAAGATCCTCGGTTGAAGAAATGTATCGATAATTTGTGCCATTGGAAGAGCATGTTGAGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTCTTACCATCCAACACCACCTGCCATTACTACATCATCTCTTTCTGCTTTGTAA 1923 0.4405 MRGTMGNSPHAVEPRHRLPATIEDLYKRRLPKNNKAKEVEKPFHLTVQDRSSRCKFSFLKLLLLVTICGTFVTLLYSPEVYNTTHLTTSGSVWLWGGSDPRYMANVDTRLSDIAKITKKLTGKDKVQGIGLVNFNKTEISGFENLNPDATHVELHLEYAARNVTWESLYPEWIDEEEEEEVPVCPSLPSLRSPGIRLNLIAVKLPCRKGVGKNWSRDVARLHLQLAAARLAASFKGNYTVHVLFVTDCFPMPNLFTCKELVGREGNAWLYRPNLSVLRQKVQLPVGSCELTIPMRGKELVYNGNAEREAYATILHSAHVYVCGAIAAAQSIRMAGSSRDLVILVDETISGYHRSGLEAAGWKVRTIKRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFAMPEITATGNNATLFNSGVMLVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKKMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPEVLQQFCLLPSKQKAQLEWDRRQAETANYTDGHWRLKIKDPRLKKCIDNLCHWKSMLRHWGETNWTDDESYHPTPPAITTSSLSAL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2008 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 617 - -
Amo10g2008 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
Amo10g2008 640 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 21 617 - -
Amo10g2008 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
Amo10g2008 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Amo10g2008 640 CDD GT8_Glycogenin 308 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2008 Amo-Chr10 72826768 72829733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2008 13 640 Glycosyltransferase AT3G18660 65.062 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2008 K20890 - gmx:100809361 1159.05