Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1897 ATGGAGCAAAGTAAAGAGAAAAATGCTCCTTGGTTATCAGTGCCACAATTTGGGGACTGGGATCAAAAGGGTGGAGTGCCTGACTACTCACTAGATTTCTCAAAAATCAGGGAAATGAGGAAACAAAACAAGACAAATCTTTCAAGGGCAAGTCTTGGAAACGAAGAAGAGCTCGTGGCTTCAACCACTACCACTACAAACGCAAGCCACACTGAGCCTGAGCCTGTACACCAGCACCCCCATTATCACCAGACAAACTCTCCAACGGCAAGGAGGAGCTTCCTCAGCTACTTCAACTGCTGTGTAAAAGCATGA 315 0.4635 MEQSKEKNAPWLSVPQFGDWDQKGGVPDYSLDFSKIREMRKQNKTNLSRASLGNEEELVASTTTTTNASHTEPEPVHQHPHYHQTNSPTARRSFLSYFNCCVKA* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1897 104 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 103 - -
Amo10g1897 104 MobiDBLite consensus disorder prediction 44 88 - -
Amo10g1897 104 MobiDBLite consensus disorder prediction 1 23 - -
Amo10g1897 104 MobiDBLite consensus disorder prediction 45 73 - -
Amo10g1897 104 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1897 Amo-Chr10 68271038 68273706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1897 - - gmx:100796591 175.252