Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1859 ATGGTAATTACATTAGTTTTGAACTGGATTAACATTTCTATCTATTGCTATCATTGCAGTAAAAGAATTCAATTTTCCCTTGCCATTCTCCTTCTTGGTGTTGGGATTGCAACAGTCACTGATTTGCAGCTCAACGTTTTGGGCTCTTTCTTGTCTCTTCTAGCAGTGGTTACAACATGTGTTGCTCAGATTATGACAAATACAATCCAGAAGAAGTTTAAGGTTTCCTCTACCCAACTTTTGTATCAATCATGTCCATATCAATCAGCAGTCTTGTTGATATCTGGACCATATCTGGATAAACTTCTGACCAACCTTAGTGTGTTTTCATTCAATTATACAACACAAGTGACGGTTGTCATTATTCTTTCATGTGTCCTGTCTATTGTTGTAAATTTTAGTACATTTCTGGTAATTGGAAAGACATCACCAGTCACCTATCAGGTTCTTGGGCATCTGAAGACATGCCTTGTATTGGCATTTGGTTACATTATTGTCCGCGACCCATTCAACTGGAGAAACATTCTGGGGATTTTGGTGGCCATGGTTGGGATGGTTATGTATTCCTACAATTGCACACTTGAGAGTCAGCAAAAATCTAATGAATCTTCATCACAAGCATTACAGGTTAGAGAAGGCGCTGATTCTGATCCTCTACTTAGTGTGGAAAACGGGAATTCAGTATTCAACAAAAGGAGCCCTGTGTGGAGCAAAGAGAAAGACTAA 726 0.3871 MVITLVLNWINISIYCYHCSKRIQFSLAILLLGVGIATVTDLQLNVLGSFLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQSAVLLISGPYLDKLLTNLSVFSFNYTTQVTVVIILSCVLSIVVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVRDPFNWRNILGILVAMVGMVMYSYNCTLESQQKSNESSSQALQVREGADSDPLLSVENGNSVFNKRSPVWSKEKD* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1859 241 Pfam Triose-phosphate Transporter family 20 189 IPR004853 -
Amo10g1859 241 PANTHER SOLUTE CARRIER FAMILY 35 18 219 - -
Amo10g1859 241 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 18 219 - -
Amo10g1859 241 SUPERFAMILY Multidrug resistance efflux transporter EmrE 114 189 - -
Amo10g1859 241 MobiDBLite consensus disorder prediction 203 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1859 Amo-Chr10 66338327 66340211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1859 4 198 Organic Solute Cotransporters AT1G77610 29.592 3.03e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1859 K15285 - gmx:100786535 350.903