Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1133 ATGAGGATAATGGTTACGTCATTGTTCATCGCAATATTCATCACAATGTTCATCATTTCCCTAACCGTTTCTGTTCAATCTTCTCCTTCCTCACAGCTGCCTCCTGTTTCCGTTAACCATAACAACTTTGACAATGACATCAATCTCTCAGGTGACGCTCACGCTGTCAAAGACCGCGTGAGTCTCACGCGCCCCTCACAGTTCAGCTCCGGCCTCCTCCTCCGAAACACATCAATCACATTCTCTTCTGCCAGCGCCAACGCCAGCGCCAACACAACCGGCACCTCCCTCTCCGTCGAATTCTCATTCTCAATCTCCCCCGCCGCCGCCTCCGACGATGGCGGTAGCGGTTTCGTCCTTATCCTCTTCCCTGGCGACTTCGAGAATGTATTCTCGGCTAACTACTCATTCGGCATCTCAAAAGAATACAGCAAAAACTATGTCGCCGTCGAATTTGACACCTCGCAAGACGACGAGTTCAACGATCCAAACGCGAACCACGTCGGAATAGACGTCGGAAGCCTCATCTCCGTCGCAATCGCGAATGTCTCCGACTCAGACATTGTCCTCAACAACGGCGAGAAGCTGAAAGCTTGGGTTGATTACGTGGCAAGTTCGAAGAATCTCGAGGTTCGGTTATGCAAGTCCAGTGAAAACCGCCCTAACGATCCGATCGTTTCGCACAAAATCGATTTGGCTAAACTCTGGGGAAACGAGCCCGTGTTCGTTGGTTTGAGTGCCTCGAACGACGCGGATTCCGTTCAGGTTGTTAGTGTGTACACGTGGAAGGTGGTGAGTTCTGGGGATGTGGCAGAACGTGAGGGTGCACGAAACGTGCCGGCTGAAGAAGAGAAGGGTAGTTTTGGAACTTTGTCGGTTCTTGCTGAGGTTATATTCGGAACTGTATGTGTTGCGTTGGTTGCTTTTGTGGTACTGTTTCTGTGGGCCATATTCTTTCAGAAGCACGAGGAAGAACAGTCATTTGCGCTTGGGAAGAGAGAGAACCTTGAGTATGAGAGGATAGATGTTGCTGTGGATAAGCAAAGTACTGAAGAGATTGAGAGATTGAATTCGTAG 1077 0.4977 MRIMVTSLFIAIFITMFIISLTVSVQSSPSSQLPPVSVNHNNFDNDINLSGDAHAVKDRVSLTRPSQFSSGLLLRNTSITFSSASANASANTTGTSLSVEFSFSISPAAASDDGGSGFVLILFPGDFENVFSANYSFGISKEYSKNYVAVEFDTSQDDEFNDPNANHVGIDVGSLISVAIANVSDSDIVLNNGEKLKAWVDYVASSKNLEVRLCKSSENRPNDPIVSHKIDLAKLWGNEPVFVGLSASNDADSVQVVSVYTWKVVSSGDVAEREGARNVPAEEEKGSFGTLSVLAEVIFGTVCVALVAFVVLFLWAIFFQKHEEEQSFALGKRENLEYERIDVAVDKQSTEEIERLNS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1133 358 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 7 350 - -
Amo10g1133 358 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Amo10g1133 358 Gene3D - 36 280 - -
Amo10g1133 358 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 267 IPR013320 -
Amo10g1133 358 CDD lectin_legume_LecRK_Arcelin_ConA 36 262 IPR001220 GO:0030246
Amo10g1133 358 Pfam Legume lectin domain 38 273 IPR001220 GO:0030246
Amo10g1133 358 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 7 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1133 Amo-Chr10 23832564 23833968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1133 46 279 Receptor kinase-like Gene Family AT5G55830 30.242 6.07e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1133 - - aip:107622087 647.891