LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo10g1080	ATGCTGTCTGCAACAGCTTCTATTTGTCTGAATTTGAAACCACAACCAGTAATATATGCAAATGCCAATTATCCAATGCATTCCCTAAGATTCTCTCGCCGGTTGGTTCTCTCCGGCGGCCGGAGTCTCACTAGGCCACTTCCCTCAGTTTCTCTTACATTGAGGTGTTGTTCTTCACTCTCAAGTTCATCATCATTCTCTGTTGATGAAGCAAGGGAATTTGTTGAAGCTTCAAGAAATGGGAACTTGATTCCTCTCCAGCAATGCATATTCTCCGATCAACTTACTCCGGTTCTTGCCTACCGGCTTTTGGTTAAGGAAGATGATGGCGAGGCTCCCAGCTTTCTTTTCGAGTCTGCAGAGCCAACTCTTGATTCCTCGAATATGGGGCGCTATAGCGTTATAGGAGCTCAACCAAGTATGGAAATTGTGGCGAAAGAAAATAGTGTTACAATAATGGACCATGAATTGGGGAAGTTAACAAGAGAGACTGTTGATGATCCTATGACGATTCCTAGAAGACTCTCGCAGGGTTGGAAGCCATGTCTTAGTAATGAACTTCCAGATGCCTTCTGTGGTGGCTGGGCAGGTTATTTCTCCTATGACACAGTTCGTTATGTGGAAAAGAAAAAACTACCATTTTCGAATGCTCCGGAGGACGACAGAAACCTCCCGGACATACATCTCGGCCTCTATGATTCTGTGGTTGTGTTTGATCATGTAGAGAAGAAAACATATGTGATTGTTTGGGTGAGGGTTGATCAATTCCCTTCGGTGGAGAGTGCTTACAACAAGGGAAAGGAACGGCTTGCGAAATTAGTCGCCAGATTACAGGATAGTAAACCTCCGAGGCTGGCTTCAGGCTCAGTGAATTTGCATACTCACCATTTCGGTCCTCCTTTAAAAATGTCAACCATGGCACCTGAAGCATACAAGGAGGCAGTCCTTCAGGCAAAAGAACACATTAAGGCAGGGGATATTTTTCAGATTGTGTTAAGCCAGAGATTCGAGCGAAGAACATTTGCTGATCCGTTTGAAGTTTATAGAGCCTTGAGAGTTGTGAATCCAAGTCCATATATGACTTATTTGCAGGCTCGGGGATGTATTTTGGTCGCTTCAAGTCCGGAGATTCTTACGCGTATAAAGAAGAACAAGATTGTGAATCGTCCATTGGCCGGGACGTGTAGAAGAGGGAAGACACTAGAGGAAGATAAGCAGTTAGAAGTGAAGCTCCTGAGTGATGAAAAGCAATGTGCAGAGCATGTCATGCTGGTTGATTTGGGACGCAATGATGTTGGAAAGGTATCAAAACCTGGTTCTGTGAAGGTGGAAAAGGTTATGAACATCGAGCGATATTCGCATGTCATGCACATAAGCTCGACGGTTTCAGGAGAGTTGCAAGAACATCTTACTTGCTGGGACGGCCTCCGTGCTGCTTTGCCGGTTGGAACTGTCAGTGGGGCACCAAAGGTGAAGGCAATGGAGCTAATTGATAAGTTGGAGGTGGCGAGGCGAGGCCCTTACAGTGGAGGATTCGGATACATATCTTTCACCGACGAAATGGACATCGCTCTAGTTTTGAGGACAATTGTATTTCCAACCACAGCTAGGGATGACACAATGTACTTGTACAAAAACTTGAACCAACGCCACGAGTGGGTCGCTCACCTTCAAGCTGGTGCTGGTATAGTTGCGGACAGTGACCCTGATGATGAGCACCAAGAGTGCCAAAACAAAGCTGCTGGTCTTGCTCGCGCCATCGACTTGGCCGAGTCAGCATTTTTAGACAAATGA	1794	0.4582	MLSATASICLNLKPQPVIYANANYPMHSLRFSRRLVLSGGRSLTRPLPSVSLTLRCCSSLSSSSSFSVDEAREFVEASRNGNLIPLQQCIFSDQLTPVLAYRLLVKEDDGEAPSFLFESAEPTLDSSNMGRYSVIGAQPSMEIVAKENSVTIMDHELGKLTRETVDDPMTIPRRLSQGWKPCLSNELPDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPEDDRNLPDIHLGLYDSVVVFDHVEKKTYVIVWVRVDQFPSVESAYNKGKERLAKLVARLQDSKPPRLASGSVNLHTHHFGPPLKMSTMAPEAYKEAVLQAKEHIKAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRIKKNKIVNRPLAGTCRRGKTLEEDKQLEVKLLSDEKQCAEHVMLVDLGRNDVGKVSKPGSVKVEKVMNIERYSHVMHISSTVSGELQEHLTCWDGLRAALPVGTVSGAPKVKAMELIDKLEVARRGPYSGGFGYISFTDEMDIALVLRTIVFPTTARDDTMYLYKNLNQRHEWVAHLQAGAGIVADSDPDDEHQECQNKAAGLARAIDLAESAFLDK*	598

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo10g1080	597	Gene3D	Anthranilate synthase	62	595	IPR005801	GO:0009058
	Amo10g1080	597	PANTHER	AMINOBENZOATE/ANTHRANILATE SYNTHASE	45	597	IPR019999	GO:0009058
	Amo10g1080	597	SUPERFAMILY	ADC synthase	81	591	IPR005801	GO:0009058
	Amo10g1080	597	PRINTS	Anthranilate synthase component I signature	409	422	IPR019999	GO:0009058
	Amo10g1080	597	PRINTS	Anthranilate synthase component I signature	423	436	IPR019999	GO:0009058
	Amo10g1080	597	PRINTS	Anthranilate synthase component I signature	503	517	IPR019999	GO:0009058
	Amo10g1080	597	PRINTS	Anthranilate synthase component I signature	518	532	IPR019999	GO:0009058
	Amo10g1080	597	Pfam	Anthranilate synthase component I, N terminal region	93	247	IPR006805	GO:0009058
	Amo10g1080	597	Pfam	chorismate binding enzyme	309	579	IPR015890	-
	Amo10g1080	597	PANTHER	ADC SYNTHASE SUPERFAMILY PROTEIN-RELATED	45	597	-	-
	Amo10g1080	597	TIGRFAM	trpE_most: anthranilate synthase component I	92	587	IPR005256	GO:0000162\|GO:0004049

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo10g1080	Amo-Chr10	21573506	21579898	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo10g1080	K01657		-	gmx:100790900	884.789